Factsheet for TraesCS5A01G075600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G081900.1	Wheat	mitochondrion	92.33	92.33
TraesCS5D01G089200.1	Wheat	mitochondrion	90.56	90.29
EES16218	Sorghum	mitochondrion	75.22	74.78
Zm00001d041518_P001	Maize	mitochondrion	73.75	73.31
Zm00001d030775_P001	Maize	mitochondrion, plastid	71.68	71.47
Os12t0577200-01	Rice	mitochondrion, plastid	72.86	70.37
GSMUA_Achr9P26820_001	Banana	plasma membrane	45.72	47.84
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	43.07	46.2
TraesCS5A01G105000.1	Wheat	plasma membrane	42.77	46.03
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.94	40.49
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	38.94	40.24
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	38.64	39.94
KRH03520	Soybean	plastid	36.87	38.58
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	34.81	36.99
KRH56883	Soybean	plasma membrane	38.64	36.69
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	34.51	36.68
CDY23069	Canola	plasma membrane	34.51	36.11
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	34.22	35.8
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	33.33	35.31
CDY02155	Canola	extracellular, peroxisome, plasma membrane	33.33	34.88
Solyc03g115690.1.1	Tomato	plasma membrane	33.04	33.73
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	35.4	33.43
PGSC0003DMT400063407	Potato	vacuole	32.45	32.84
Solyc06g069680.1.1	Tomato	plasma membrane	31.86	32.34
VIT_14s0108g01250.t01	Wine grape	plasma membrane	29.2	30.56
TraesCS2A01G183300.1	Wheat	plasma membrane	23.01	23.57

Protein Annotations

EnsemblPlants:TraesCS5A01G075600.1	EnsemblPlantsGene:TraesCS5A01G075600	PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:90927738..90928757

Molecular Weight (calculated)

35021.0 Da

IEP (calculated)

10.374

GRAVY (calculated)

0.615

Length

339 amino acids

Sequence
(BLAST)

001: MVRRGGLLTG GYGGASSWKA GRVMRAAVAA FFNGYHCFSP VAAMLALPFS AAVLASQAAA SSSSSSSGAV LRGVSSRLRG MFHAAGFPPS PFFALLNGKL
101: SQTVFTYAAT LPVALTVLLL AKACVAGVLR ADPAHDRRRR GRMSLPPCGA VARAYPALVA THLVGSFAML SANAAAFSLL FLAFGAADLL GFTSRASTLA
201: LSAAGAIAYS VAVGVATVVC NLAVVVAAME ERCAGHAAVL RACVLIRGRV PTALALALPT NLGMAAAEAL FQLRVVSQRR KAGRLAPGVA GEAFSIAYIH
301: ALCVVLEIIV SCMFYRSCRR SEADELRELE PEEKGDLQA

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.