Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 2
- plasma membrane 4
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g115690.1.1 | Tomato | plasma membrane | 58.38 | 58.73 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 50.0 | 51.23 |
| KRH03520 | Soybean | plastid | 46.71 | 48.15 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 46.41 | 47.26 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 45.51 | 46.34 |
| KRH56883 | Soybean | plasma membrane | 46.71 | 43.7 |
| GSMUA_Achr9P26820_001 | Banana | plasma membrane | 40.72 | 41.98 |
| Bra012967.1-P | Field mustard | extracellular, mitochondrion, peroxisome, plasma membrane | 39.82 | 41.05 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 38.62 | 40.44 |
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 39.22 | 40.43 |
| CDY23069 | Canola | plasma membrane | 38.62 | 39.81 |
| Bra035935.1-P | Field mustard | extracellular, peroxisome, plasma membrane, plastid | 37.72 | 39.5 |
| GSMUA_Achr1P24470_001 | Banana | endoplasmic reticulum, plasma membrane | 34.73 | 39.19 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 37.43 | 39.06 |
| AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 41.62 | 38.72 |
| GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 36.53 | 38.61 |
| GSMUA_Achr6P24000_001 | Banana | mitochondrion | 33.83 | 36.1 |
| TraesCS5B01G081900.1 | Wheat | mitochondrion | 32.93 | 32.45 |
| TraesCS5D01G089200.1 | Wheat | mitochondrion | 32.93 | 32.35 |
| Os12t0577200-01 | Rice | mitochondrion, plastid | 33.53 | 31.91 |
| TraesCS5A01G075600.1 | Wheat | mitochondrion | 32.34 | 31.86 |
| TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 29.94 | 31.85 |
| TraesCS5B01G108400.1 | Wheat | mitochondrion, plastid | 29.94 | 31.85 |
| TraesCS5A01G105000.1 | Wheat | plasma membrane | 29.64 | 31.43 |
| Zm00001d041518_P001 | Maize | mitochondrion | 32.04 | 31.38 |
| HORVU5Hr1G028310.1 | Barley | plastid | 30.54 | 31.1 |
| EES16218 | Sorghum | mitochondrion | 31.74 | 31.09 |
| Zm00001d030775_P001 | Maize | mitochondrion, plastid | 30.84 | 30.29 |
| Os12t0507400-00 | Rice | mitochondrion | 28.74 | 29.27 |
| Zm00001d035322_P001 | Maize | mitochondrion | 29.94 | 28.9 |
| KXG23542 | Sorghum | mitochondrion, plastid | 28.44 | 27.38 |
| Solyc01g010990.2.1 | Tomato | peroxisome | 23.95 | 22.04 |
| Solyc05g012870.1.1 | Tomato | cytosol, nucleus, plasma membrane | 23.05 | 21.69 |
| GSMUA_Achr3P18800_001 | Banana | plastid | 16.77 | 18.79 |
Protein Annotations
| EnsemblPlants:Solyc06g069680.1.1 | EnsemblPlantsGene:Solyc06g069680.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33133 |
| PANTHER:PTHR33133:SF3 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002766B60 | UniProt:K4C8E1 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6:-:43401334..43402338
Molecular Weight (calculated)
36940.6 Da
IEP (calculated)
7.825
GRAVY (calculated)
0.751
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDYSSVPMQ GSGKIIRRSI FIFLQNYQFY TTIAAVLAFP FAASVLLLQA FVPSTCFLLA IHDHLHSLFD AVGLPSSSKL FTLLNSKLSQ TFAISFLAFP
101: FTLTSLLFAK ASVIEALSDQ KSFKKPAFFS FCSLYSSLLL TQLCNTIVII SANATCFTLL FFTFNIFNYG FNLSSPSPIL FISATGAIIC SIISASTLII
201: CNLALVLSGL ENIGGYMAIL KACFLIKGKN ATALSLAVIF NLAFAAVEVL YQYRIVKSYH HKRTGFSAIA LEGMFIAYLY AILLVLDTIS SCLFFECCKK
301: SCQMDEEGCF PYQIEIEDRD HHTVLLIKNL EELS
101: FTLTSLLFAK ASVIEALSDQ KSFKKPAFFS FCSLYSSLLL TQLCNTIVII SANATCFTLL FFTFNIFNYG FNLSSPSPIL FISATGAIIC SIISASTLII
201: CNLALVLSGL ENIGGYMAIL KACFLIKGKN ATALSLAVIF NLAFAAVEVL YQYRIVKSYH HKRTGFSAIA LEGMFIAYLY AILLVLDTIS SCLFFECCKK
301: SCQMDEEGCF PYQIEIEDRD HHTVLLIKNL EELS
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.