Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24000_001 | Banana | mitochondrion | 55.74 | 52.72 |
| GSMUA_Achr9P26820_001 | Banana | plasma membrane | 47.64 | 43.52 |
| GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 45.27 | 42.41 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 45.61 | 41.16 |
| KRH03520 | Soybean | plastid | 44.93 | 41.05 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 44.93 | 40.55 |
| KRH56883 | Soybean | plasma membrane | 46.62 | 38.66 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 41.89 | 38.04 |
| PGSC0003DMT400063407 | Potato | vacuole | 40.2 | 35.52 |
| Solyc03g115690.1.1 | Tomato | plasma membrane | 39.19 | 34.94 |
| Solyc06g069680.1.1 | Tomato | plasma membrane | 39.19 | 34.73 |
| VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 35.47 | 32.41 |
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 35.14 | 32.1 |
| CDY23069 | Canola | plasma membrane | 34.46 | 31.48 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 33.78 | 31.35 |
| Bra035935.1-P | Field mustard | extracellular, peroxisome, plasma membrane, plastid | 33.45 | 31.03 |
| Bra012967.1-P | Field mustard | extracellular, mitochondrion, peroxisome, plasma membrane | 33.78 | 30.86 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 33.11 | 30.62 |
| GSMUA_Achr3P18800_001 | Banana | plastid | 30.74 | 30.54 |
| AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 34.8 | 28.69 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 19.26 | 20.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P24470_001 | EnsemblPlants:GSMUA_Achr1T24470_001 | EnsemblPlantsGene:GSMUA_Achr1G24470_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33133 | PANTHER:PTHR33133:SF3 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294D3C5 | UniProt:M0S2Q4 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G24470_001]
Coordinates
chr1:+:18873670..18874560
Molecular Weight (calculated)
31450.8 Da
IEP (calculated)
7.529
GRAVY (calculated)
0.934
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEAIKILRT SFHAFFLSYH TFISTAALLV FPYSIVTLLS QSSSSSSPYL LPAISSRLWL LFEASGFPSS HFFALLNVKL SQAAFSFVAA LPLGATSLIL
101: AKASVFQTIH GKLPSLASLL RLYPSLVLTY LCNSFLVLAA NAAVLSLLFL AFNAADVLDL ASSSLTLAIS VAGVILYSLV LAHALITCNM ATIISAAENT
201: GGYLCILEAL VLVHGKMATA ITLALPASLG AAAMEALFHC RVIRPYSESG GKLQPLAILE AVSIAYSYSL LLVFDTIITC NFVKSCKSEE KDDVHV
101: AKASVFQTIH GKLPSLASLL RLYPSLVLTY LCNSFLVLAA NAAVLSLLFL AFNAADVLDL ASSSLTLAIS VAGVILYSLV LAHALITCNM ATIISAAENT
201: GGYLCILEAL VLVHGKMATA ITLALPASLG AAAMEALFHC RVIRPYSESG GKLQPLAILE AVSIAYSYSL LLVFDTIITC NFVKSCKSEE KDDVHV
001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.