Factsheet for GSMUA_Achr3P18800_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24000_001	Banana	mitochondrion	33.89	32.27
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	30.54	30.74
GSMUA_Achr9P26820_001	Banana	plasma membrane	26.85	24.69
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	23.83	21.65
KRH03520	Soybean	plastid	23.49	21.6
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	23.15	21.04
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	22.15	20.89
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	22.82	20.86
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	21.48	20.06
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	21.14	19.75
CDY02155	Canola	extracellular, peroxisome, plasma membrane	21.14	19.44
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	21.14	19.44
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	20.81	19.38
CDY23069	Canola	plasma membrane	20.81	19.14
PGSC0003DMT400063407	Potato	vacuole	21.48	19.1
KRH56883	Soybean	plasma membrane	22.82	19.05
Solyc03g115690.1.1	Tomato	plasma membrane	21.14	18.98
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	21.81	18.11
VIT_14s0108g01250.t01	Wine grape	plasma membrane	18.79	17.28
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	15.44	16.91
Solyc06g069680.1.1	Tomato	plasma membrane	18.79	16.77

Protein Annotations

EnsemblPlants:GSMUA_Achr3P18800_001	EnsemblPlants:GSMUA_Achr3T18800_001	EnsemblPlantsGene:GSMUA_Achr3G18800_001	PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	SEG:seg
UniParc:UPI000296DF45	UniProt:M0SFU6	MapMan:35.2	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G18800_001]

Coordinates

chr3:-:20180903..20181799

Molecular Weight (calculated)

32024.4 Da

IEP (calculated)

10.073

GRAVY (calculated)

0.000

Length

298 amino acids

Sequence
(BLAST)

001: MPSSGATRPS PRPLLSWSSP PRPPLSWRSH STSLTPSSER SPRASRSCST PPGSLRPASS PSSTSSSRSP SSPSSLLFLS RSRSWSQLKH PFTGSSAELL
101: AAMQLAFSTS THASRGLPSS IRCSFSRQML LCCPFCSWPS TWWTCFTCLR ATPPSPSPPP ASSSTPSCSP MVTCNLSIVI SVTDGSGGHL SILKALVLVK
201: GRTATAITLT LPASLGMAGI EALFQYRVIR PYRVAGTLHV SVIWEAFSII YMHSLLVVLD TIITCTFLES CQSGIRSSWR KSDDAVDMES EPKFSLHV

Best Arabidopsis Sequence Match ( AT5G61340.2 )
(BLAST)

001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.