Factsheet for Solyc03g115690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063407	Potato	vacuole	92.17	91.34
Solyc06g069680.1.1	Tomato	plasma membrane	58.73	58.38
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.51	52.45
KRH03520	Soybean	plastid	47.29	48.46
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	47.59	48.17
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	47.29	47.87
KRH56883	Soybean	plasma membrane	47.59	44.26
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	39.76	40.74
CDY02155	Canola	extracellular, peroxisome, plasma membrane	39.46	40.43
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	38.55	40.13
GSMUA_Achr9P26820_001	Banana	plasma membrane	39.16	40.12
CDY23069	Canola	plasma membrane	38.55	39.51
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	37.95	39.5
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	37.35	39.24
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	34.94	39.19
GSMUA_Achr6P24000_001	Banana	mitochondrion	36.75	38.98
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	37.05	38.44
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	39.16	36.21
TraesCS5A01G075600.1	Wheat	mitochondrion	33.73	33.04
EES16218	Sorghum	mitochondrion	33.73	32.84
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	31.02	32.8
TraesCS5B01G081900.1	Wheat	mitochondrion	33.43	32.74
TraesCS5A01G105000.1	Wheat	plasma membrane	31.02	32.7
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	30.72	32.48
TraesCS5D01G089200.1	Wheat	mitochondrion	33.13	32.35
Zm00001d041518_P001	Maize	mitochondrion	33.13	32.26
HORVU5Hr1G028310.1	Barley	plastid	31.63	32.01
Zm00001d030775_P001	Maize	mitochondrion, plastid	32.53	31.76
Os12t0577200-01	Rice	mitochondrion, plastid	33.43	31.62
Os12t0507400-00	Rice	mitochondrion	31.02	31.4
Zm00001d035322_P001	Maize	mitochondrion	29.82	28.61
KXG23542	Sorghum	mitochondrion, plastid	29.22	27.95
Solyc01g010990.2.1	Tomato	peroxisome	24.7	22.59
Solyc05g012870.1.1	Tomato	cytosol, nucleus, plasma membrane	23.19	21.69
GSMUA_Achr3P18800_001	Banana	plastid	18.98	21.14

Protein Annotations

EnsemblPlants:Solyc03g115690.1.1	EnsemblPlantsGene:Solyc03g115690.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33133
PANTHER:PTHR33133:SF3	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002768B3C	UniProt:K4BL71	MapMan:35.2

Description

No Description!

Coordinates

chr3:-:65330004..65331002

Molecular Weight (calculated)

37312.8 Da

IEP (calculated)

7.907

GRAVY (calculated)

0.659

Length

332 amino acids

Sequence
(BLAST)

001: METYSSVPME KTTKIIRKSI FIFLQNYQFF TTTTAFFAFP FAASVLFLQS FIYSSSLYPI IYERLHLLFD AAGFPSSSEF FILLNSKISQ TILISFLSFP
101: FTISFYLFAK SVVIESLKYS KPSQRTTFPS YFNLLVTQLC NSLLIISANA TCFTLLFFGF NLFDYGFGLS NPRTILLLSA TGAVLCSIIL ANTLIICNLA
201: LVTSGNERIG GFMAILKSCV LIRGRTATAL SLAVPVNLAL AAVEALFQYR IVNAYYQEKT ELFTLALEGM FIAYIYSLLI VLDTIASCVF YKSCKTEEHG
301: IFPVSSISTY QDEIQHRDQC IVVKIKTLEE FC

Best Arabidopsis Sequence Match ( AT5G61340.2 )
(BLAST)

001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.