Factsheet for TraesCS5D01G116000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	97.13	97.13
TraesCS5A01G105000.1	Wheat	plasma membrane	97.13	96.83
HORVU5Hr1G028310.1	Barley	plastid	89.17	85.37
Os12t0507400-00	Rice	mitochondrion	76.75	73.48
KXG23542	Sorghum	mitochondrion, plastid	68.79	62.25
Zm00001d035322_P001	Maize	mitochondrion	64.33	58.38
TraesCS5D01G089200.1	Wheat	mitochondrion	46.18	42.65
GSMUA_Achr9P26820_001	Banana	plasma membrane	39.49	38.27
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	38.22	37.97
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.53	37.12
KRH03520	Soybean	plastid	37.9	36.73
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.26	35.67
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.26	35.67
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	35.67	35.11
CDY23069	Canola	plasma membrane	35.99	34.88
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	35.35	34.8
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	34.71	34.06
CDY02155	Canola	extracellular, peroxisome, plasma membrane	35.03	33.95
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	34.71	33.64
KRH56883	Soybean	plasma membrane	37.26	32.77
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	36.94	32.31
PGSC0003DMT400063407	Potato	vacuole	33.44	31.34
VIT_14s0108g01250.t01	Wine grape	plasma membrane	32.17	31.17
Solyc03g115690.1.1	Tomato	plasma membrane	32.8	31.02
Solyc06g069680.1.1	Tomato	plasma membrane	31.85	29.94
TraesCS2D01G191100.1	Wheat	plasma membrane	23.25	22.05

Protein Annotations

EnsemblPlants:TraesCS5D01G116000.1	EnsemblPlantsGene:TraesCS5D01G116000	PANTHER:PTHR33133	PANTHER:PTHR33133:SF11	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:135649405..135650349

Molecular Weight (calculated)

32880.8 Da

IEP (calculated)

9.680

GRAVY (calculated)

0.754

Length

314 amino acids

Sequence
(BLAST)

001: MGSATKIMRA ALHAFFSHYH PAASAAALLA LPFSAAALLS RSPAASLLPP LSLRLRRVLV AAGFPPASQL LFLLNHKLSQ SVFSFLATLP FSLSFLLLAK
101: ACAVRAVQAP PPPQKQRHHE LSALPASCHR YPAMARTQLA NFAALLLANA AVFAALLAAF NAAEALRLGS DGRAVLALSA VGVIVYSVAL ANAAAVCNLA
201: TVVAAAEGRG GCHAVLKALL LVRGDAATAV AVALPASLAT TAVEGLFQLR VMKLYMIDGR ISSAMVCEGL LIAYIHSMIC VLDTVITFMV YQTCKATHYS
301: RDLLELEEKG DLIA

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.