Factsheet for Os12t0507400-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	73.48	76.75
TraesCS5A01G105000.1	Wheat	plasma membrane	73.17	76.19
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	72.87	76.11
HORVU5Hr1G028310.1	Barley	plastid	74.09	74.09
KXG23542	Sorghum	mitochondrion, plastid	63.41	59.94
Zm00001d035322_P001	Maize	mitochondrion	60.67	57.51
GSMUA_Achr9P26820_001	Banana	plasma membrane	39.94	40.43
Os12t0577200-01	Rice	mitochondrion, plastid	42.99	40.17
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	35.67	37.03
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.28	36.5
KRH03520	Soybean	plastid	35.37	35.8
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	35.06	35.06
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	34.76	34.76
CDY23069	Canola	plasma membrane	32.01	32.41
CDY02155	Canola	extracellular, peroxisome, plasma membrane	32.01	32.41
KRH56883	Soybean	plasma membrane	35.06	32.21
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	31.71	32.1
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	30.79	31.66
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	30.49	31.35
VIT_14s0108g01250.t01	Wine grape	plasma membrane	30.79	31.17
Solyc03g115690.1.1	Tomato	plasma membrane	31.4	31.02
PGSC0003DMT400063407	Potato	vacuole	31.4	30.75
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	29.88	30.62
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	32.32	29.53
Solyc06g069680.1.1	Tomato	plasma membrane	29.27	28.74
Os07t0595900-01	Rice	endoplasmic reticulum, plasma membrane	24.7	26.47

Protein Annotations

EnsemblPlants:Os12t0507400-00	EnsemblPlantsGene:Os12g0507400	EntrezGene:4352302	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF11	ProteinID:ABA98691.1	ProteinID:BAF29864.1	ProteinID:BAT17300.1	RefSeq:XP_015619262.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0000681013	UniProt:Q2QQ46	MapMan:35.2	:

Description

Conserved hypothetical protein. (Os12t0507400-00)

Coordinates

chr12:-:19481391..19482395

Molecular Weight (calculated)

33782.9 Da

IEP (calculated)

10.198

GRAVY (calculated)

0.841

Length

328 amino acids

Sequence
(BLAST)

001: MGSATRIVRM ALHAFFSHYH PAASAAALLA LPFSAAALVS RSPALLQLAA PPRAILLLQP ALSRRLRRVF VAAGFPPASQ LLFLLNHRLS QSIVSFLATL
101: PLAMSFLLLA KAYAVHAVVA ARGRGARRCV GGAAPSMASL VRASYPAMAR TQLASFGALL SAHAAVFAAL LAAFNAAEAL RLGSDGRAVL ALSAAGVIVY
201: SVALANAAAV CNLATVVAAA EGGRGGARAV LRAVLLVRGD AATAVAVALP ATLATAAVEG LFQLRIARPY AVTGELTSSM VCEGFLIAYI YSIICVLDTV
301: ITCMVYQTCK MSHSCDLLEL EEKGDLAA

Best Arabidopsis Sequence Match ( AT5G61340.2 )
(BLAST)

001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.