Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012967.1-P Field mustard extracellular, mitochondrion, peroxisome, plasma membrane 94.44 94.44
CDY23069 Canola plasma membrane 91.05 91.05
CDY16815 Canola extracellular, peroxisome, plasma membrane, plastid 80.56 81.82
CDX87208 Canola extracellular, peroxisome, plasma membrane, plastid 77.78 78.75
AT5G61340.2 Thale cress cytosol, peroxisome, plasma membrane 80.56 72.7
VIT_17s0000g06630.t01 Wine grape endoplasmic reticulum, mitochondrion, plasma membrane, plastid 48.15 47.85
KRH63289 Soybean extracellular, mitochondrion, plasma membrane, plastid 46.6 46.04
KRH03520 Soybean plastid 45.37 45.37
KRH54594 Soybean extracellular, mitochondrion, plasma membrane, plastid 44.44 43.9
KRH56883 Soybean plasma membrane 45.37 41.18
PGSC0003DMT400063407 Potato vacuole 41.67 40.3
Solyc03g115690.1.1 Tomato plasma membrane 40.43 39.46
Solyc06g069680.1.1 Tomato plasma membrane 40.43 39.22
GSMUA_Achr9P09480_001 Banana mitochondrion, plasma membrane 37.65 38.61
GSMUA_Achr6P24000_001 Banana mitochondrion 36.42 37.7
GSMUA_Achr9P26820_001 Banana plasma membrane 37.65 37.65
TraesCS5B01G108400.1 Wheat mitochondrion, plastid 34.26 35.35
GSMUA_Achr1P24470_001 Banana endoplasmic reticulum, plasma membrane 32.1 35.14
TraesCS5D01G116000.1 Wheat endoplasmic reticulum, plasma membrane, plastid 33.95 35.03
TraesCS5A01G105000.1 Wheat plasma membrane 33.95 34.92
VIT_14s0108g01250.t01 Wine grape plasma membrane 34.57 34.57
HORVU5Hr1G028310.1 Barley plastid 34.57 34.15
TraesCS5A01G075600.1 Wheat mitochondrion 34.88 33.33
TraesCS5B01G081900.1 Wheat mitochondrion 34.57 33.04
TraesCS5D01G089200.1 Wheat mitochondrion 34.57 32.94
Zm00001d041518_P001 Maize mitochondrion 34.57 32.84
EES16218 Sorghum mitochondrion 34.57 32.84
Zm00001d030775_P001 Maize mitochondrion, plastid 33.95 32.35
Os12t0507400-00 Rice mitochondrion 32.41 32.01
Os12t0577200-01 Rice mitochondrion, plastid 34.57 31.91
KXG23542 Sorghum mitochondrion, plastid 32.72 30.55
Zm00001d035322_P001 Maize mitochondrion 32.41 30.35
CDX95932 Canola extracellular, plasma membrane, vacuole 23.15 23.66
CDY40929 Canola extracellular, plasma membrane, vacuole 23.15 23.66
CDX85037 Canola plasma membrane 23.46 22.62
CDY16174 Canola plasma membrane 22.53 21.73
GSMUA_Achr3P18800_001 Banana plastid 19.44 21.14
Protein Annotations
EnsemblPlants:CDY02155EnsemblPlantsGene:GSBRNA2T00113556001GO:A0A078EJB8PANTHER:PTHR33133PANTHER:PTHR33133:SF3ProteinID:CDY02155
ProteinID:CDY02155.1SEG:segTMHMM:TMhelixUniParc:UPI0004EEE60DMapMan:35.2:
Description
BnaA03g40120D
Coordinates
chrLK031932:+:420732..421964
Molecular Weight (calculated)
35979.7 Da
IEP (calculated)
9.328
GRAVY (calculated)
0.428
Length
324 amino acids
Sequence
(BLAST)
001: MKKTMEEPSK IMRRSIHTFL KHYDRATTAA ALVLPFSAAL LLSQPFFSSS SSSLHAKLNM LFRGAGFSSS LDFFNILSLK LSQTLSSSLF TLPFSITFLL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIC NSFFLLSANA SALALFFVAF NLIESFGLSS RNFYTLFSLS SAIIYSIILA NAFVISNLAL VSSTSSSSGG
201: YTTILKACLL IQGRTSTALA LSLPTNLCLA GVEALFQYRV VSSYYKGDRG ITSIALEGAF IAYLYALFLV LDTIVNYLFY QSCVKNDEDQ RISREDEYSI
301: KIQISETENT KICIKGPKSF QEIL
Best Arabidopsis Sequence Match ( AT5G61340.2 )
(BLAST)
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.