Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra012967.1-P | Field mustard | extracellular, mitochondrion, peroxisome, plasma membrane | 94.44 | 94.44 |
CDY23069 | Canola | plasma membrane | 91.05 | 91.05 |
CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 80.56 | 81.82 |
CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 77.78 | 78.75 |
AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 80.56 | 72.7 |
VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 48.15 | 47.85 |
KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 46.6 | 46.04 |
KRH03520 | Soybean | plastid | 45.37 | 45.37 |
KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 44.44 | 43.9 |
KRH56883 | Soybean | plasma membrane | 45.37 | 41.18 |
PGSC0003DMT400063407 | Potato | vacuole | 41.67 | 40.3 |
Solyc03g115690.1.1 | Tomato | plasma membrane | 40.43 | 39.46 |
Solyc06g069680.1.1 | Tomato | plasma membrane | 40.43 | 39.22 |
GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 37.65 | 38.61 |
GSMUA_Achr6P24000_001 | Banana | mitochondrion | 36.42 | 37.7 |
GSMUA_Achr9P26820_001 | Banana | plasma membrane | 37.65 | 37.65 |
TraesCS5B01G108400.1 | Wheat | mitochondrion, plastid | 34.26 | 35.35 |
GSMUA_Achr1P24470_001 | Banana | endoplasmic reticulum, plasma membrane | 32.1 | 35.14 |
TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 33.95 | 35.03 |
TraesCS5A01G105000.1 | Wheat | plasma membrane | 33.95 | 34.92 |
VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 34.57 | 34.57 |
HORVU5Hr1G028310.1 | Barley | plastid | 34.57 | 34.15 |
TraesCS5A01G075600.1 | Wheat | mitochondrion | 34.88 | 33.33 |
TraesCS5B01G081900.1 | Wheat | mitochondrion | 34.57 | 33.04 |
TraesCS5D01G089200.1 | Wheat | mitochondrion | 34.57 | 32.94 |
Zm00001d041518_P001 | Maize | mitochondrion | 34.57 | 32.84 |
EES16218 | Sorghum | mitochondrion | 34.57 | 32.84 |
Zm00001d030775_P001 | Maize | mitochondrion, plastid | 33.95 | 32.35 |
Os12t0507400-00 | Rice | mitochondrion | 32.41 | 32.01 |
Os12t0577200-01 | Rice | mitochondrion, plastid | 34.57 | 31.91 |
KXG23542 | Sorghum | mitochondrion, plastid | 32.72 | 30.55 |
Zm00001d035322_P001 | Maize | mitochondrion | 32.41 | 30.35 |
CDX95932 | Canola | extracellular, plasma membrane, vacuole | 23.15 | 23.66 |
CDY40929 | Canola | extracellular, plasma membrane, vacuole | 23.15 | 23.66 |
CDX85037 | Canola | plasma membrane | 23.46 | 22.62 |
CDY16174 | Canola | plasma membrane | 22.53 | 21.73 |
GSMUA_Achr3P18800_001 | Banana | plastid | 19.44 | 21.14 |
Protein Annotations
EnsemblPlants:CDY02155 | EnsemblPlantsGene:GSBRNA2T00113556001 | GO:A0A078EJB8 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF3 | ProteinID:CDY02155 |
ProteinID:CDY02155.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEE60D | MapMan:35.2 | : |
Description
BnaA03g40120D
Coordinates
chrLK031932:+:420732..421964
Molecular Weight (calculated)
35979.7 Da
IEP (calculated)
9.328
GRAVY (calculated)
0.428
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKTMEEPSK IMRRSIHTFL KHYDRATTAA ALVLPFSAAL LLSQPFFSSS SSSLHAKLNM LFRGAGFSSS LDFFNILSLK LSQTLSSSLF TLPFSITFLL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIC NSFFLLSANA SALALFFVAF NLIESFGLSS RNFYTLFSLS SAIIYSIILA NAFVISNLAL VSSTSSSSGG
201: YTTILKACLL IQGRTSTALA LSLPTNLCLA GVEALFQYRV VSSYYKGDRG ITSIALEGAF IAYLYALFLV LDTIVNYLFY QSCVKNDEDQ RISREDEYSI
301: KIQISETENT KICIKGPKSF QEIL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIC NSFFLLSANA SALALFFVAF NLIESFGLSS RNFYTLFSLS SAIIYSIILA NAFVISNLAL VSSTSSSSGG
201: YTTILKACLL IQGRTSTALA LSLPTNLCLA GVEALFQYRV VSSYYKGDRG ITSIALEGAF IAYLYALFLV LDTIVNYLFY QSCVKNDEDQ RISREDEYSI
301: KIQISETENT KICIKGPKSF QEIL
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.