Factsheet for TraesCS5D01G089200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G081900.1	Wheat	mitochondrion	94.71	94.99
TraesCS5A01G075600.1	Wheat	mitochondrion	90.29	90.56
EES16218	Sorghum	mitochondrion	75.0	74.78
Zm00001d041518_P001	Maize	mitochondrion	71.76	71.55
Zm00001d030775_P001	Maize	mitochondrion, plastid	69.71	69.71
Os12t0577200-01	Rice	mitochondrion, plastid	71.18	68.95
GSMUA_Achr9P26820_001	Banana	plasma membrane	45.29	47.53
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	42.65	46.18
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	42.35	45.57
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.24	39.88
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.94	39.33
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.94	39.33
KRH03520	Soybean	plastid	36.47	38.27
KRH56883	Soybean	plasma membrane	37.94	36.13
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	33.82	36.05
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	33.53	35.74
CDY23069	Canola	plasma membrane	33.53	35.19
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	33.24	34.88
CDY02155	Canola	extracellular, peroxisome, plasma membrane	32.94	34.57
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	32.35	34.38
Solyc03g115690.1.1	Tomato	plasma membrane	32.35	33.13
Solyc06g069680.1.1	Tomato	plasma membrane	32.35	32.93
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	34.71	32.87
PGSC0003DMT400063407	Potato	vacuole	32.06	32.54
VIT_14s0108g01250.t01	Wine grape	plasma membrane	28.82	30.25
TraesCS2D01G191100.1	Wheat	plasma membrane	22.06	22.66

Protein Annotations

EnsemblPlants:TraesCS5D01G089200.1	EnsemblPlantsGene:TraesCS5D01G089200	PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:95880926..95882252

Molecular Weight (calculated)

35297.4 Da

IEP (calculated)

10.384

GRAVY (calculated)

0.601

Length

340 amino acids

Sequence
(BLAST)

001: MVRRGGLLTG GYYGGASSWK AGRVMRAAVA AFFNGYHCFS PVAAMLALPF SAAVLASQAA ASSSTSSSGA VLRGVSSRLR GMFHAAGFPP SPFFALLNGK
101: LSQTVFTYAA TLPVALTVLL LAKACVAGVL RADPAHERRR RGRMSLPPCG AVARAYPALV ATHLVGSFAM LSANAAAFSL LFLAFGAADL LGFTSRSSKL
201: ALSAAGAIVY SVAVGVATVV CNLAVVVAAM EERCAGHAAV LRACVLIRGR VPTALALALP TNLGMAAAEA LFQLRVVSQR RKAGRLAPGV AGEAFSIAYI
301: HALCVVLEII ISCMFYRSCR RSEADELREL EPEEKGDLQA

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.