Factsheet for Zm00001d030775_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16218	Sorghum	mitochondrion	82.06	81.82
Zm00001d041518_P001	Maize	mitochondrion	81.76	81.52
TraesCS5A01G075600.1	Wheat	mitochondrion	71.47	71.68
TraesCS5B01G081900.1	Wheat	mitochondrion	69.71	69.91
TraesCS5D01G089200.1	Wheat	mitochondrion	69.71	69.71
Os12t0577200-01	Rice	mitochondrion, plastid	68.53	66.38
GSMUA_Achr9P26820_001	Banana	plasma membrane	43.53	45.68
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	40.59	43.67
Zm00001d035322_P001	Maize	mitochondrion	39.41	38.73
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.06	38.41
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	37.06	38.41
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.47	38.04
KRH03520	Soybean	plastid	34.12	35.8
KRH56883	Soybean	plasma membrane	36.76	35.01
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	32.65	34.8
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	32.35	34.48
CDY23069	Canola	plasma membrane	32.65	34.26
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	32.65	34.26
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	32.06	34.06
CDY02155	Canola	extracellular, peroxisome, plasma membrane	32.35	33.95
PGSC0003DMT400063407	Potato	vacuole	32.35	32.84
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	34.41	32.59
Solyc03g115690.1.1	Tomato	plasma membrane	31.76	32.53
Solyc06g069680.1.1	Tomato	plasma membrane	30.29	30.84
VIT_14s0108g01250.t01	Wine grape	plasma membrane	27.65	29.01
Zm00001d022037_P001	Maize	plasma membrane	23.53	24.17

Protein Annotations

EnsemblPlants:Zm00001d030775_P001	EnsemblPlants:Zm00001d030775_T001	EnsemblPlantsGene:Zm00001d030775	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	ProteinID:ONM01519.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002213FA2
UniProt:A0A1D6KED3	MapMan:35.2	:	:	:	:

Description

Expressed protein; protein

Coordinates

chr1:+:159139619..159140641

Molecular Weight (calculated)

34697.8 Da

IEP (calculated)

10.096

GRAVY (calculated)

0.803

Length

340 amino acids

Sequence
(BLAST)

001: MRRAGGLSRA GHGAAPAAGV MRAAASAFFA GYHCFTSVAA LLALPFSAAV LVAEAAAAAP APAPVALRAL AARLRAVFAA AGFPPSPFFA LLEAKLSQTV
101: FTFAAALPFA LTFLLLAKAC VAAMLRDDAA SPRRHRRRRW PGVAALPACG AVARAYPAVL ATHVLGAFLM LSANAAAFSL LLLAFGAADL LGLTSRAWTL
201: ALSAAGAVAY SLAVGVAAVV CNLAVVVAAT EPGCAGHAAV LRACVAIRGR VSTALALALP TNLGMAAAEA LFGLRVVAQR RRDGRLAPAV AAEAFSIAYI
301: HAVCVVLEII VACVFYRSCK RSEADELREL EPEEKGDLQA

Best Arabidopsis Sequence Match ( AT5G61340.2 )
(BLAST)

001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.