Factsheet for Zm00001d022037_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26650.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT1G26650.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT1G26650.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT1G26650.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT1G26650.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT1G26650.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT1G26650.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT1G26650.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97483	Sorghum	cytosol, extracellular, plasma membrane	95.47	95.47
TraesCS2A01G183300.1	Wheat	plasma membrane	83.99	83.99
TraesCS2B01G209900.1	Wheat	plasma membrane	83.69	83.69
TraesCS2D01G191100.1	Wheat	plasma membrane	83.08	83.08
Os07t0595900-01	Rice	endoplasmic reticulum, plasma membrane	76.13	82.35
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	43.5	52.94
Bra004384.1-P	Field mustard	extracellular, plasma membrane, vacuole	46.53	48.58
CDX95932	Canola	extracellular, plasma membrane, vacuole	46.53	48.58
CDY40929	Canola	extracellular, plasma membrane, vacuole	46.53	48.58
VIT_01s0113g00470.t01	Wine grape	plasma membrane	46.53	44.38
KRH50552	Soybean	plasma membrane	47.43	43.98
KRG89547	Soybean	plasma membrane	47.43	43.49
AT1G69430.1	Thale cress	plastid	45.62	43.14
AT1G26650.1	Thale cress	plasma membrane	43.2	42.69
CDX85037	Canola	plasma membrane	42.6	41.96
CDY16174	Canola	plasma membrane	41.99	41.37
Bra024700.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.99	41.37
Solyc05g012870.1.1	Tomato	cytosol, nucleus, plasma membrane	43.2	40.28
PGSC0003DMT400072841	Potato	cytosol, nucleus, plasma membrane	43.2	39.94
PGSC0003DMT400068981	Potato	nucleus, peroxisome, plasma membrane	43.5	39.67
Solyc01g010990.2.1	Tomato	peroxisome	42.6	38.84
Zm00001d030775_P001	Maize	mitochondrion, plastid	24.17	23.53
Zm00001d041518_P001	Maize	mitochondrion	23.26	22.58
Zm00001d035322_P001	Maize	mitochondrion	23.26	22.25

Protein Annotations

EnsemblPlants:Zm00001d022037_P001	EnsemblPlants:Zm00001d022037_T001	EnsemblPlantsGene:Zm00001d022037	EntrezGene:103634377	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33133	PANTHER:PTHR33133:SF1	ProteinID:ONM59349.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00022103FA	UniProt:A0A1D6IIP2	MapMan:35.2	:	:	:

Description

Whole genome shotgun sequence of line PN40024 scaffold_113.assembly12x (Fragment)

Coordinates

chr7:+:168395883..168396878

Molecular Weight (calculated)

34764.4 Da

IEP (calculated)

8.064

GRAVY (calculated)

0.864

Length

331 amino acids

Sequence
(BLAST)

001: MAPTRGAGGG VRLPPMNALE ILRETVRVLR GDPHAFTSIL FLLLCPASGC LLLSAAALDG AVVLPLARRL LAAAATSGLP LTHFVGQLAH HLAATLVSAV
101: VSLPALLTLL LAARAAVAYT VAAVYAGKPL AAGDITLLAR RAWPRLAATY ALGCAAVAVG LVAFLALLVT ACSTLRAMLY PPDIVVCAGL FTVLAYSVVY
201: AHTIIICNLG GVIAVLEEVA GINALRRSVQ LMRGQTHVGL LIFLGSTIGL AFVEGLFEHR VKTLSYGDGS SRLWEGPLLV LMYSVVMLVD SMMSAVFYFT
301: CRSSNLDFLD EQGGSVEELE MMRAGSLDAF R

Best Arabidopsis Sequence Match ( AT1G69430.1 )
(BLAST)

001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL

Arabidopsis Description

Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.