Factsheet for Bra024700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra004709.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26650.1	Bra000267.1-P	AT2G42580.1	19000166
AT1G26650.1	Bra004709.1-P	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16174	Canola	plasma membrane	97.62	97.62
AT1G26650.1	Thale cress	plasma membrane	84.52	84.78
Bra004384.1-P	Field mustard	extracellular, plasma membrane, vacuole	66.96	70.98
KRH50552	Soybean	plasma membrane	61.31	57.7
VIT_01s0113g00470.t01	Wine grape	plasma membrane	59.52	57.64
KRG89547	Soybean	plasma membrane	61.61	57.34
PGSC0003DMT400068981	Potato	nucleus, peroxisome, plasma membrane	60.71	56.2
Solyc01g010990.2.1	Tomato	peroxisome	59.82	55.37
PGSC0003DMT400072841	Potato	cytosol, nucleus, plasma membrane	58.63	55.03
Solyc05g012870.1.1	Tomato	cytosol, nucleus, plasma membrane	58.04	54.93
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	39.58	48.9
Os07t0595900-01	Rice	endoplasmic reticulum, plasma membrane	40.77	44.77
TraesCS2A01G183300.1	Wheat	plasma membrane	42.86	43.5
TraesCS2B01G209900.1	Wheat	plasma membrane	42.86	43.5
TraesCS2D01G191100.1	Wheat	plasma membrane	42.86	43.5
EER97483	Sorghum	cytosol, extracellular, plasma membrane	41.96	42.6
Zm00001d022037_P001	Maize	plasma membrane	41.37	41.99
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	22.02	23.2
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	22.02	22.84

Protein Annotations

EnsemblPlants:Bra024700.1	EnsemblPlants:Bra024700.1-P	EnsemblPlantsGene:Bra024700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000254280A	UniProt:M4E7E5
MapMan:35.2	:	:	:	:	:

Description

AT1G26650 (E=7e-156) | unknown protein

Coordinates

chrA09:+:23428803..23429813

Molecular Weight (calculated)

36909.7 Da

IEP (calculated)

8.136

GRAVY (calculated)

0.715

Length

336 amino acids

Sequence
(BLAST)

001: METESNPILR KTELKSYSHK HFHSTNALEI LRESVRILRY NLGAFMLTAA VLICPVSAVL LPNFLVDHSL VNKLTVKLLL VAKSSGLPLQ PFVKHSCQKF
101: AETAVSSAMC FPLFVTVSLL SKTAVVYSVD ATYSREKVEI NKFLVALKKL WKRVVYTYLW VCILIVGCFT FFCVLLVSIC SSFSVLGFSP DFNVYGAILV
201: GLAFSIVFAN AIIVCNTAVV ISVLEDVSGA GALARASDLI KGQVQVGLLI FLGSTLGLAF VEGLFDHRVK KVSYGDGSSR LWEGPLLVVM YSFVTLIDSM
301: MSAVFYFSCR VYYSMEASSV GEAQPIMMDT VEVVDT

Best Arabidopsis Sequence Match ( AT1G26650.1 )
(BLAST)

001: METETNQVLR KPELKSYSHK QFHSSNALEI LRETVRILRY NLGALMLTTA VLICPVSALL LPNFLVDQSL VNKLTVKLLL VAKSSGLPLQ PFVKHSCQKF
101: AETAVSSAMC FPVFITVSLL SKAAVVYSVD CSYSREVVDI SKFLVILQKI WRRVVFTYVW ICILIVGCFT FFCVLLVAIC SSFSVLGFSP DFNVYGAMLV
201: GLAFSVVFAN AIIICNTAIV ISVLEDVSGL GALMRASDLI KGQIQVGLLM FLGSTLGLAF VEGLFDHRVK KVSYGDGSSR LWEGPLLVLM YSFVTLIDSM
301: MSAVFYFSCR VYYSMEASRG ETQPIMETVT VVDAE

Arabidopsis Description

Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9LQY7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.