Factsheet for Os07t0595900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, nucleus, plasma membrane
PProwler:	secretory
TargetP:	secretory
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G26650.1	Os01t0218200-00	AT2G42580.1	19000166
AT1G26650.1	Os05t0210600-01	AT2G42580.1	19000166
AT1G26650.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G209900.1	Wheat	plasma membrane	85.29	78.85
TraesCS2A01G183300.1	Wheat	plasma membrane	85.29	78.85
TraesCS2D01G191100.1	Wheat	plasma membrane	84.31	77.95
EER97483	Sorghum	cytosol, extracellular, plasma membrane	83.66	77.34
Zm00001d022037_P001	Maize	plasma membrane	82.35	76.13
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	44.44	50.0
Bra004384.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.04	46.37
CDX95932	Canola	extracellular, plasma membrane, vacuole	48.04	46.37
CDY40929	Canola	extracellular, plasma membrane, vacuole	47.71	46.06
AT1G26650.1	Thale cress	plasma membrane	45.75	41.79
CDX85037	Canola	plasma membrane	45.42	41.37
KRH50552	Soybean	plasma membrane	48.04	41.18
AT1G69430.1	Thale cress	plastid	47.06	41.14
CDY16174	Canola	plasma membrane	45.1	41.07
KRG89547	Soybean	plasma membrane	48.37	41.0
VIT_01s0113g00470.t01	Wine grape	plasma membrane	46.41	40.92
Bra024700.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.77	40.77
Solyc05g012870.1.1	Tomato	cytosol, nucleus, plasma membrane	44.44	38.31
PGSC0003DMT400072841	Potato	cytosol, nucleus, plasma membrane	44.12	37.71
PGSC0003DMT400068981	Potato	nucleus, peroxisome, plasma membrane	44.12	37.19
Solyc01g010990.2.1	Tomato	peroxisome	43.46	36.64
Os12t0507400-00	Rice	mitochondrion	26.47	24.7
Os12t0577200-01	Rice	mitochondrion, plastid	22.55	19.66

Protein Annotations

EnsemblPlants:Os07t0595900-01	EnsemblPlantsGene:Os07g0595900	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33133
PANTHER:PTHR33133:SF1	ProteinID:BAT02472.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0003938CD2	UniProt:A0A0P0X8B6
MapMan:35.2	:	:	:	:	:

Description

Hypothetical conserved gene. (Os07t0595900-01)

Coordinates

chr7:+:24250134..24251465

Molecular Weight (calculated)

32268.2 Da

IEP (calculated)

7.752

GRAVY (calculated)

0.971

Length

306 amino acids

Sequence
(BLAST)

001: VRVLRADPHA FTSVLFFLLC PASGCLLLSA AALEGAAVLP LARRLLAAAA ASGLPLTHFV RQLAHHLAAT LVASVVSFPA TFTLLLAARA AAAYAVAAVY
101: AGKPLLAGAE LSLLARRAWP RLAATYALAC AAVIACLSSF LALLVTACST LKFMLYPPDI VVCAGLLTVL AFSVAYAHTI IVCNLGGVIA VLEDIAGVSA
201: LRRSVQLMRG QTHVGLLIFL GSTIGLAFVE GLFEHRVKTL SYGDGSSRLW EGPLLVLMYS FVMLIDSMMS VVFYFTCRSS SMEILDDEGG SIEELEMMVG
301: SNSVIR

Best Arabidopsis Sequence Match ( AT1G69430.1 )
(BLAST)

001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL

Arabidopsis Description

Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.