Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004384.1-P | Field mustard | extracellular, plasma membrane, vacuole | 100.0 | 100.0 |
| CDY40929 | Canola | extracellular, plasma membrane, vacuole | 98.74 | 98.74 |
| AT1G69430.1 | Thale cress | plastid | 87.38 | 79.14 |
| CDX85037 | Canola | plasma membrane | 71.61 | 67.56 |
| CDY16174 | Canola | plasma membrane | 71.61 | 67.56 |
| VIT_01s0113g00470.t01 | Wine grape | plasma membrane | 65.93 | 60.23 |
| KRH50552 | Soybean | plasma membrane | 64.98 | 57.7 |
| KRG89547 | Soybean | plasma membrane | 65.3 | 57.34 |
| Solyc05g012870.1.1 | Tomato | cytosol, nucleus, plasma membrane | 62.46 | 55.77 |
| PGSC0003DMT400072841 | Potato | cytosol, nucleus, plasma membrane | 62.78 | 55.59 |
| PGSC0003DMT400068981 | Potato | nucleus, peroxisome, plasma membrane | 61.83 | 53.99 |
| Solyc01g010990.2.1 | Tomato | peroxisome | 61.2 | 53.44 |
| Os07t0595900-01 | Rice | endoplasmic reticulum, plasma membrane | 46.37 | 48.04 |
| EER97483 | Sorghum | cytosol, extracellular, plasma membrane | 49.53 | 47.43 |
| TraesCS2A01G183300.1 | Wheat | plasma membrane | 48.9 | 46.83 |
| TraesCS2B01G209900.1 | Wheat | plasma membrane | 48.9 | 46.83 |
| TraesCS2D01G191100.1 | Wheat | plasma membrane | 48.9 | 46.83 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 40.06 | 46.69 |
| Zm00001d022037_P001 | Maize | plasma membrane | 48.58 | 46.53 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 23.34 | 23.2 |
| CDY23069 | Canola | plasma membrane | 23.66 | 23.15 |
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 23.66 | 23.15 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 22.08 | 21.88 |
Protein Annotations
| EnsemblPlants:CDX95932 | EnsemblPlantsGene:GSBRNA2T00101945001 | GO:A0A078E479 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF1 | ProteinID:CDX95932 |
| ProteinID:CDX95932.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002541893 | MapMan:35.2 | : |
Description
BnaA07g27990D
Coordinates
chrLK031892:+:147475..149237
Molecular Weight (calculated)
34801.6 Da
IEP (calculated)
8.069
GRAVY (calculated)
0.948
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MNALEILRET VRILRYNLAA FTLTLLLLIC PVSAILLPNL LVDQSVVNSL TIRLLLLAKS SGLPLLPFVR NSCQKFSETA VSSAACFPLF VTLSLLSRAA
101: VVYSVDCTYS RRKVVATKFV VIMQRLWKRL VFTYLWVCVV IVVCLTSFCV FLVAVCSSFF VLGFSPDFNA YGAILIGLGF SVVFANVIII CNTTIVISIL
201: EDVSGPRALV RANDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKILSY GDGSSRIWEG PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG
301: GGTQPIMEMV SQDLSLL
101: VVYSVDCTYS RRKVVATKFV VIMQRLWKRL VFTYLWVCVV IVVCLTSFCV FLVAVCSSFF VLGFSPDFNA YGAILIGLGF SVVFANVIII CNTTIVISIL
201: EDVSGPRALV RANDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKILSY GDGSSRIWEG PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG
301: GGTQPIMEMV SQDLSLL
001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
Arabidopsis Description
Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.