Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 91.05 | 91.05 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 82.1 | 83.39 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 79.63 | 80.62 |
| AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 82.1 | 74.09 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 47.84 | 47.55 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 47.84 | 47.26 |
| KRH03520 | Soybean | plastid | 45.68 | 45.68 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 45.37 | 44.82 |
| KRH56883 | Soybean | plasma membrane | 45.68 | 41.46 |
| PGSC0003DMT400063407 | Potato | vacuole | 40.74 | 39.4 |
| Solyc06g069680.1.1 | Tomato | plasma membrane | 39.81 | 38.62 |
| Solyc03g115690.1.1 | Tomato | plasma membrane | 39.51 | 38.55 |
| GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 37.35 | 38.29 |
| GSMUA_Achr9P26820_001 | Banana | plasma membrane | 37.96 | 37.96 |
| GSMUA_Achr6P24000_001 | Banana | mitochondrion | 36.11 | 37.38 |
| TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 34.88 | 35.99 |
| TraesCS5A01G105000.1 | Wheat | plasma membrane | 34.88 | 35.87 |
| TraesCS5B01G108400.1 | Wheat | mitochondrion, plastid | 34.57 | 35.67 |
| VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 34.88 | 34.88 |
| HORVU5Hr1G028310.1 | Barley | plastid | 35.19 | 34.76 |
| TraesCS5A01G075600.1 | Wheat | mitochondrion | 36.11 | 34.51 |
| GSMUA_Achr1P24470_001 | Banana | endoplasmic reticulum, plasma membrane | 31.48 | 34.46 |
| TraesCS5B01G081900.1 | Wheat | mitochondrion | 35.19 | 33.63 |
| TraesCS5D01G089200.1 | Wheat | mitochondrion | 35.19 | 33.53 |
| Zm00001d041518_P001 | Maize | mitochondrion | 34.88 | 33.14 |
| EES16218 | Sorghum | mitochondrion | 34.88 | 33.14 |
| Zm00001d030775_P001 | Maize | mitochondrion, plastid | 34.26 | 32.65 |
| Os12t0577200-01 | Rice | mitochondrion, plastid | 35.19 | 32.48 |
| Os12t0507400-00 | Rice | mitochondrion | 32.41 | 32.01 |
| KXG23542 | Sorghum | mitochondrion, plastid | 33.33 | 31.12 |
| Zm00001d035322_P001 | Maize | mitochondrion | 33.02 | 30.92 |
| CDY40929 | Canola | extracellular, plasma membrane, vacuole | 23.15 | 23.66 |
| CDX95932 | Canola | extracellular, plasma membrane, vacuole | 23.15 | 23.66 |
| CDX85037 | Canola | plasma membrane | 23.46 | 22.62 |
| CDY16174 | Canola | plasma membrane | 22.53 | 21.73 |
| GSMUA_Achr3P18800_001 | Banana | plastid | 19.14 | 20.81 |
Protein Annotations
| EnsemblPlants:CDY23069 | EnsemblPlantsGene:GSBRNA2T00021542001 | GO:A0A078GCN0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33133 | PANTHER:PTHR33133:SF3 | ProteinID:CDY23069 | ProteinID:CDY23069.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EDB30F | UniProt:A0A078GCN0 | MapMan:35.2 | : | : | : |
Description
BnaC07g31180DBnaC07g31180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCN0]
Coordinates
chrLK032139:+:421223..422250
Molecular Weight (calculated)
36209.0 Da
IEP (calculated)
9.426
GRAVY (calculated)
0.417
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKTMEEPSK IMRRSIHTFL KHYDRATTAA ALVLPFSAAL LLSQPFVSSS SSFLHGKLNM LFRGAGFSFS LDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIW NSFFLLSANA SAFALFFVAF NLIEYFGLSS RNFYTLFSLS SAIIYSVILA NAFVISNLAL ISSTSSSSGG
201: YPTILKACLL IQGRTSTALA LSLPTNLGLA GVEALFQYRV VSSYYKGDRD ITSIALEGTF IAYLYALFLV LDTIVNFLFY QSCVKNDEEQ KIGREDEYSI
301: KIQISETENT KICIKGPKSF QEIL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIW NSFFLLSANA SAFALFFVAF NLIEYFGLSS RNFYTLFSLS SAIIYSVILA NAFVISNLAL ISSTSSSSGG
201: YPTILKACLL IQGRTSTALA LSLPTNLGLA GVEALFQYRV VSSYYKGDRD ITSIALEGTF IAYLYALFLV LDTIVNFLFY QSCVKNDEEQ KIGREDEYSI
301: KIQISETENT KICIKGPKSF QEIL
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.