Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 2
- plasma membrane 4
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 67.28 | 68.99 |
| GSMUA_Achr6P24000_001 | Banana | mitochondrion | 50.62 | 52.4 |
| GSMUA_Achr1P24470_001 | Banana | endoplasmic reticulum, plasma membrane | 43.52 | 47.64 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 46.3 | 46.01 |
| TraesCS5B01G081900.1 | Wheat | mitochondrion | 47.84 | 45.72 |
| TraesCS5A01G075600.1 | Wheat | mitochondrion | 47.84 | 45.72 |
| Zm00001d041518_P001 | Maize | mitochondrion | 47.84 | 45.45 |
| TraesCS5D01G089200.1 | Wheat | mitochondrion | 47.53 | 45.29 |
| EES16218 | Sorghum | mitochondrion | 46.6 | 44.28 |
| Zm00001d030775_P001 | Maize | mitochondrion, plastid | 45.68 | 43.53 |
| Os12t0577200-01 | Rice | mitochondrion, plastid | 46.91 | 43.3 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 43.21 | 42.68 |
| KRH03520 | Soybean | plastid | 41.98 | 41.98 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 41.98 | 41.46 |
| Solyc06g069680.1.1 | Tomato | plasma membrane | 41.98 | 40.72 |
| Os12t0507400-00 | Rice | mitochondrion | 40.43 | 39.94 |
| TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 38.27 | 39.49 |
| Solyc03g115690.1.1 | Tomato | plasma membrane | 40.12 | 39.16 |
| TraesCS5A01G105000.1 | Wheat | plasma membrane | 37.96 | 39.05 |
| TraesCS5B01G108400.1 | Wheat | mitochondrion, plastid | 37.35 | 38.53 |
| CDY23069 | Canola | plasma membrane | 37.96 | 37.96 |
| PGSC0003DMT400063407 | Potato | vacuole | 39.2 | 37.91 |
| Bra012967.1-P | Field mustard | extracellular, mitochondrion, peroxisome, plasma membrane | 37.65 | 37.65 |
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 37.65 | 37.65 |
| KRH56883 | Soybean | plasma membrane | 41.36 | 37.53 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 36.73 | 37.19 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 36.42 | 36.99 |
| Bra035935.1-P | Field mustard | extracellular, peroxisome, plasma membrane, plastid | 36.11 | 36.68 |
| HORVU5Hr1G028310.1 | Barley | plastid | 37.04 | 36.59 |
| VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 35.49 | 35.49 |
| AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 38.89 | 35.1 |
| Zm00001d035322_P001 | Maize | mitochondrion | 36.11 | 33.81 |
| KXG23542 | Sorghum | mitochondrion, plastid | 35.8 | 33.43 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 24.07 | 28.68 |
| GSMUA_Achr3P18800_001 | Banana | plastid | 24.69 | 26.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P26820_001 | EnsemblPlants:GSMUA_Achr9T26820_001 | EnsemblPlantsGene:GSMUA_Achr9G26820_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33133 | PANTHER:PTHR33133:SF3 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295C1C2 | UniProt:M0U3T9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G26820_001]
Coordinates
chr9:+:31157276..31158250
Molecular Weight (calculated)
35354.7 Da
IEP (calculated)
7.962
GRAVY (calculated)
0.736
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAVWIVRR SINAFFDGYQ SFTSIAALLV FPVSASVLLS QALIPFATPP LLEAISLRLW SLFQAARFPA SVGFFSLLNV KLAQTVFTFV STLPLVLTFQ
101: LLAKASVVHV VCEGRDPRRK RGPPPLSSFL PLYRSILPTH LFNSFVVLSA NASTFALLFL VFNAVDLLGL STSNVVLCLS AAGAVLYSVV VANTTVICNL
201: AIVVSATDNC GGYLPVLKAC LLIRGRVMTA LGLALPANLG MAAVEALFQY RVVRQYNLSG ELNSSLFWEA FSITYFHALL VVLDVIMSCM FFKICRTDCH
301: SDCEKGHEHH GEELEPEDKV TLHV
101: LLAKASVVHV VCEGRDPRRK RGPPPLSSFL PLYRSILPTH LFNSFVVLSA NASTFALLFL VFNAVDLLGL STSNVVLCLS AAGAVLYSVV VANTTVICNL
201: AIVVSATDNC GGYLPVLKAC LLIRGRVMTA LGLALPANLG MAAVEALFQY RVVRQYNLSG ELNSSLFWEA FSITYFHALL VVLDVIMSCM FFKICRTDCH
301: SDCEKGHEHH GEELEPEDKV TLHV
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.