Factsheet for HORVU5Hr1G028310.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	85.37	89.17
TraesCS5A01G105000.1	Wheat	plasma membrane	85.37	88.89
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	85.06	88.85
Os12t0507400-00	Rice	mitochondrion	74.09	74.09
KXG23542	Sorghum	mitochondrion, plastid	66.16	62.54
Zm00001d035322_P001	Maize	mitochondrion	61.89	58.67
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.41	38.65
KRH03520	Soybean	plastid	37.5	37.96
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	35.98	37.34
GSMUA_Achr9P26820_001	Banana	plasma membrane	36.59	37.04
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	36.89	36.89
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	36.89	36.89
CDY23069	Canola	plasma membrane	34.76	35.19
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	33.84	34.8
CDY02155	Canola	extracellular, peroxisome, plasma membrane	34.15	34.57
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	33.54	34.48
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	33.54	33.95
KRH56883	Soybean	plasma membrane	36.89	33.89
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	32.62	33.44
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	35.67	32.59
VIT_14s0108g01250.t01	Wine grape	plasma membrane	31.4	31.79
PGSC0003DMT400063407	Potato	vacuole	32.32	31.64
Solyc03g115690.1.1	Tomato	plasma membrane	32.01	31.63
Solyc06g069680.1.1	Tomato	plasma membrane	31.1	30.54

Protein Annotations

EnsemblPlants:HORVU5Hr1G028310.1	EnsemblPlantsGene:HORVU5Hr1G028310	PANTHER:PTHR33133	PANTHER:PTHR33133:SF11	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002966187	UniProt:M0WI21	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:166928285..166929271

Molecular Weight (calculated)

34696.0 Da

IEP (calculated)

9.147

GRAVY (calculated)

0.746

Length

328 amino acids

Sequence
(BLAST)

001: MGSATKIMRT ALHAFFSHYH PAASAAALLA LPFSAAALLS RSPAASLLLL PTLSRRLRRV LVAAGFPPAS QLLFLLNHKL SQSVLSFLAT LPFSLSFLLL
101: AKACAVRAMQ SPSPPRKQRH HELSLPASCW CWCYCYPAMA RTQLANFAAL LLANAAVFAA LLAAFNAAEA LLLGSDGRAV LALSAVGVIV YSVALANAAA
201: VCNLATVVAA AEGRGGCRAV LKALLLVRGD AATAVAVALP ASLATTAVEG LFQLRVMKPY IVDGRISSAM VCEGLLIAYI HSVICVLDTV ITFMVYQTCK
301: ATHYSPHLLE LEEKGDFFAL PEYLQNLT

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.