Factsheet for AT5G61340.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16815	Canola	extracellular, peroxisome, plasma membrane, plastid	72.98	82.13
CDY23069	Canola	plasma membrane	74.09	82.1
Bra012967.1-P	Field mustard	extracellular, mitochondrion, peroxisome, plasma membrane	73.82	81.79
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	72.42	81.5
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	71.87	80.62
CDY02155	Canola	extracellular, peroxisome, plasma membrane	72.7	80.56
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.18	47.55
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	42.9	46.95
KRH03520	Soybean	plastid	41.78	46.3
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	41.5	45.43
KRH56883	Soybean	plasma membrane	42.9	43.14
Solyc06g069680.1.1	Tomato	plasma membrane	38.72	41.62
PGSC0003DMT400063407	Potato	vacuole	37.33	40.0
Solyc03g115690.1.1	Tomato	plasma membrane	36.21	39.16
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	34.26	38.92
GSMUA_Achr9P26820_001	Banana	plasma membrane	35.1	38.89
GSMUA_Achr6P24000_001	Banana	mitochondrion	33.15	38.02
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	32.31	36.94
TraesCS5A01G105000.1	Wheat	plasma membrane	32.31	36.83
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	31.75	36.31
HORVU5Hr1G028310.1	Barley	plastid	32.59	35.67
TraesCS5A01G075600.1	Wheat	mitochondrion	33.43	35.4
VIT_14s0108g01250.t01	Wine grape	plasma membrane	31.75	35.19
TraesCS5B01G081900.1	Wheat	mitochondrion	32.87	34.81
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	28.69	34.8
TraesCS5D01G089200.1	Wheat	mitochondrion	32.87	34.71
Zm00001d041518_P001	Maize	mitochondrion	32.87	34.6
EES16218	Sorghum	mitochondrion	32.87	34.6
Zm00001d030775_P001	Maize	mitochondrion, plastid	32.59	34.41
Os12t0577200-01	Rice	mitochondrion, plastid	32.59	33.33
Os12t0507400-00	Rice	mitochondrion	29.53	32.32
KXG23542	Sorghum	mitochondrion, plastid	30.64	31.7
Zm00001d035322_P001	Maize	mitochondrion	30.08	31.21
AT1G26650.1	Thale cress	plasma membrane	21.45	22.99
AT1G69430.1	Thale cress	plastid	21.73	22.29
GSMUA_Achr3P18800_001	Banana	plastid	18.11	21.81

Protein Annotations

ArrayExpress:AT5G61340	EnsemblPlants:AT5G61340.2	EnsemblPlantsGene:AT5G61340	EntrezGene:836255	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	ProteinID:ANM71135.1	ProteinID:BAB08489.1	RefSeq:AT5G61340
RefSeq:AT5G61340-TAIR-G	RefSeq:NP_001332684.1	SEG:seg	TAIR:AT5G61340	TMHMM:TMhelix	UniParc:UPI00000A767C
UniProt:Q9FLJ9	MapMan:35.2	:	:	:	:

Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]

Coordinates

chr5:-:24661679..24663217

Molecular Weight (calculated)

40239.8 Da

IEP (calculated)

9.952

GRAVY (calculated)

0.227

Length

359 amino acids

Sequence
(BLAST)

001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.