CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, extracellular, plasma membrane

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	98.75	98.75
CDX87208	Canola	extracellular, peroxisome, plasma membrane, plastid	93.73	93.44
CDY23069	Canola	plasma membrane	83.39	82.1
CDY02155	Canola	extracellular, peroxisome, plasma membrane	81.82	80.56
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	82.13	72.98
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	48.28	46.95
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	47.34	46.32
KRH03520	Soybean	plastid	46.4	45.68
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	46.71	45.43
KRH56883	Soybean	plasma membrane	46.71	41.74
PGSC0003DMT400063407	Potato	vacuole	41.38	39.4
Solyc06g069680.1.1	Tomato	plasma membrane	40.44	38.62
Solyc03g115690.1.1	Tomato	plasma membrane	40.13	38.55
GSMUA_Achr6P24000_001	Banana	mitochondrion	36.05	36.74
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	36.36	36.71
GSMUA_Achr9P26820_001	Banana	plasma membrane	36.99	36.42
VIT_14s0108g01250.t01	Wine grape	plasma membrane	36.05	35.49
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	34.8	35.35
TraesCS5A01G105000.1	Wheat	plasma membrane	34.8	35.24
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	34.48	35.03
TraesCS5A01G075600.1	Wheat	mitochondrion	36.99	34.81
TraesCS5B01G081900.1	Wheat	mitochondrion	36.05	33.92
TraesCS5D01G089200.1	Wheat	mitochondrion	36.05	33.82
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	31.35	33.78
Zm00001d041518_P001	Maize	mitochondrion	36.05	33.72
EES16218	Sorghum	mitochondrion	36.05	33.72
HORVU5Hr1G028310.1	Barley	plastid	34.48	33.54
Zm00001d030775_P001	Maize	mitochondrion, plastid	34.8	32.65
Os12t0577200-01	Rice	mitochondrion, plastid	34.48	31.34
Os12t0507400-00	Rice	mitochondrion	31.35	30.49
KXG23542	Sorghum	mitochondrion, plastid	32.6	29.97
Zm00001d035322_P001	Maize	mitochondrion	31.97	29.48
CDX95932	Canola	extracellular, plasma membrane, vacuole	23.2	23.34
CDY40929	Canola	extracellular, plasma membrane, vacuole	23.2	23.34
CDX85037	Canola	plasma membrane	23.51	22.32
CDY16174	Canola	plasma membrane	22.88	21.73
GSMUA_Achr3P18800_001	Banana	plastid	20.06	21.48

Protein Annotations

EnsemblPlants:CDY16815	EnsemblPlantsGene:GSBRNA2T00094699001	GO:A0A078FQR0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	ProteinID:CDY16815	ProteinID:CDY16815.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE7EE9	UniProt:A0A078FQR0	MapMan:35.2	:	:	:

Description

BnaA09g05670DBnaA09g05670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQR0]

Coordinates

chrLK032067:+:492684..494280

Molecular Weight (calculated)

35437.1 Da

IEP (calculated)

9.622

GRAVY (calculated)

0.420

Length

319 amino acids

Sequence
(BLAST)

001: MKKTMEDPSK IMRRSVHTFL QHYHRATTAA AVALPFSTAL LLSQPFFSSS SSSIHMKLNT LLRGAGFSSS LEFFNILSLK LSQTLSSSLL TLPFSLTFLL
101: FSKAYIIKLL SNNHDSIYYF RLLRTYICNS FFILSANASA FALFFLASTI LDSFGFSSRN FYTLFSLSSA IIYSIILANA FVISNLALVS SPSSSSGGYT
201: TLLKACLLLR GRTSTALALA LPTNLGLAGV EALFRYRVMR SFYKGDRDVT SIAIEGTLIA YLYALFLVLD TIVNFFFYQS CVKNEEEQKI GGDDEYSIKI
301: QICESENTKI CIKGPKSLF

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.