Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 96.83 | 97.13 |
| TraesCS5B01G108400.1 | Wheat | mitochondrion, plastid | 96.19 | 96.5 |
| HORVU5Hr1G028310.1 | Barley | plastid | 88.89 | 85.37 |
| Os12t0507400-00 | Rice | mitochondrion | 76.19 | 73.17 |
| KXG23542 | Sorghum | mitochondrion, plastid | 68.57 | 62.25 |
| Zm00001d035322_P001 | Maize | mitochondrion | 64.76 | 58.96 |
| TraesCS5A01G075600.1 | Wheat | mitochondrion | 46.03 | 42.77 |
| GSMUA_Achr9P09480_001 | Banana | mitochondrion, plasma membrane | 38.1 | 37.97 |
| GSMUA_Achr9P26820_001 | Banana | plasma membrane | 39.05 | 37.96 |
| VIT_17s0000g06630.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 39.05 | 37.73 |
| KRH03520 | Soybean | plastid | 37.78 | 36.73 |
| KRH54594 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 37.46 | 35.98 |
| KRH63289 | Soybean | extracellular, mitochondrion, plasma membrane, plastid | 37.14 | 35.67 |
| Bra035935.1-P | Field mustard | extracellular, peroxisome, plasma membrane, plastid | 35.56 | 35.11 |
| CDY23069 | Canola | plasma membrane | 35.87 | 34.88 |
| CDY16815 | Canola | extracellular, peroxisome, plasma membrane, plastid | 35.24 | 34.8 |
| CDX87208 | Canola | extracellular, peroxisome, plasma membrane, plastid | 34.6 | 34.06 |
| CDY02155 | Canola | extracellular, peroxisome, plasma membrane | 34.92 | 33.95 |
| Bra012967.1-P | Field mustard | extracellular, mitochondrion, peroxisome, plasma membrane | 34.6 | 33.64 |
| KRH56883 | Soybean | plasma membrane | 37.14 | 32.77 |
| AT5G61340.2 | Thale cress | cytosol, peroxisome, plasma membrane | 36.83 | 32.31 |
| VIT_14s0108g01250.t01 | Wine grape | plasma membrane | 32.38 | 31.48 |
| PGSC0003DMT400063407 | Potato | vacuole | 33.33 | 31.34 |
| Solyc03g115690.1.1 | Tomato | plasma membrane | 32.7 | 31.02 |
| Solyc06g069680.1.1 | Tomato | plasma membrane | 31.43 | 29.64 |
| TraesCS2A01G183300.1 | Wheat | plasma membrane | 22.86 | 21.75 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G105000.1 | EnsemblPlantsGene:TraesCS5A01G105000 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF11 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:169302889..169304161
Molecular Weight (calculated)
33073.1 Da
IEP (calculated)
10.001
GRAVY (calculated)
0.706
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSATKIMRA ALHAFFSHYH PAASAAALLA LPFSAATLLS RSPAASLLPP LSLRLRRVLV AAGFPPASQL LFLLNHKLSQ SVFSFLATLP FSLSFLLLAK
101: ACAVRAMQPP PPPPRKQRRH ELSALPASCG RYPAMARTQL ANFAALLLAN AAVFAALLAA FNAAEALRLG SDGRAVLALS AAGVIVYSVA LANAAAVCNL
201: ATVVAAAEGR GGCHAVLKAL LLVRGDAATA VAVALPASLA TTAVEGLFQL RVMKLYMIDG RISSAMVCEG LLIAYIHSMI CVLDTVITFM VYQTCKATHY
301: SRDLLELEEK GDFFA
101: ACAVRAMQPP PPPPRKQRRH ELSALPASCG RYPAMARTQL ANFAALLLAN AAVFAALLAA FNAAEALRLG SDGRAVLALS AAGVIVYSVA LANAAAVCNL
201: ATVVAAAEGR GGCHAVLKAL LLVRGDAATA VAVALPASLA TTAVEGLFQL RVMKLYMIDG RISSAMVCEG LLIAYIHSMI CVLDTVITFM VYQTCKATHY
301: SRDLLELEEK GDFFA
001: MTCIEKTLSR FGGSFKKHTY SNFSKEKKIA KTRMKKTMED PSKIMRRSIH TFLQNYHRVT TAAAVALPFS AGLLLSQPFF SSSSSTLHMR LNMLFRGAGF
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
101: SSSHDFFNIL SLKLSQTLSS SLFTLPFSLT FLLLSKAYVI KLLSNNHSAD SSSVFYLRLL KTYVCNFFFL LSANASAFAL FFLAYNTLEA FGFSSRNFYT
201: FLSLSSAIIY SIIIANAFVI SNLALVSSPS SSSGGYTNIL KACLLIRGRN STAMALALPT NLGLAGVEAL FQYRVMRSYY NGDRDIISIA LEGTFIAYLY
301: ALFLVLDTIV NFLFYQSCIK NEEDQNIGRE DEYSIKIQIS ETENTKIHIK GSKNLQEIL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.