Factsheet for Bra012967.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, extracellular, plasma membrane

Predictor Summary:

plastid 1
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, peroxisome, plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02155	Canola	extracellular, peroxisome, plasma membrane	94.44	94.44
Bra035935.1-P	Field mustard	extracellular, peroxisome, plasma membrane, plastid	80.86	82.13
AT5G61340.2	Thale cress	cytosol, peroxisome, plasma membrane	81.79	73.82
VIT_17s0000g06630.t01	Wine grape	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	47.84	47.55
KRH63289	Soybean	extracellular, mitochondrion, plasma membrane, plastid	46.91	46.34
KRH03520	Soybean	plastid	45.37	45.37
KRH54594	Soybean	extracellular, mitochondrion, plasma membrane, plastid	44.44	43.9
KRH56883	Soybean	plasma membrane	45.37	41.18
PGSC0003DMT400063407	Potato	vacuole	41.98	40.6
Solyc06g069680.1.1	Tomato	plasma membrane	41.05	39.82
Solyc03g115690.1.1	Tomato	plasma membrane	40.74	39.76
GSMUA_Achr9P09480_001	Banana	mitochondrion, plasma membrane	37.65	38.61
GSMUA_Achr9P26820_001	Banana	plasma membrane	37.65	37.65
GSMUA_Achr6P24000_001	Banana	mitochondrion	36.11	37.38
VIT_14s0108g01250.t01	Wine grape	plasma membrane	35.49	35.49
TraesCS5B01G108400.1	Wheat	mitochondrion, plastid	33.95	35.03
TraesCS5D01G116000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	33.64	34.71
TraesCS5A01G105000.1	Wheat	plasma membrane	33.64	34.6
TraesCS5A01G075600.1	Wheat	mitochondrion	35.8	34.22
GSMUA_Achr1P24470_001	Banana	endoplasmic reticulum, plasma membrane	30.86	33.78
HORVU5Hr1G028310.1	Barley	plastid	33.95	33.54
TraesCS5B01G081900.1	Wheat	mitochondrion	34.88	33.33
TraesCS5D01G089200.1	Wheat	mitochondrion	34.88	33.24
EES16218	Sorghum	mitochondrion	34.88	33.14
Zm00001d041518_P001	Maize	mitochondrion	34.88	33.14
Zm00001d030775_P001	Maize	mitochondrion, plastid	34.26	32.65
Os12t0507400-00	Rice	mitochondrion	32.1	31.71
Os12t0577200-01	Rice	mitochondrion, plastid	34.26	31.62
Zm00001d035322_P001	Maize	mitochondrion	32.41	30.35
KXG23542	Sorghum	mitochondrion, plastid	32.41	30.26
Bra004384.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.53	23.03
Bra024700.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.84	22.02
GSMUA_Achr3P18800_001	Banana	plastid	19.44	21.14

Protein Annotations

EnsemblPlants:Bra012967.1	EnsemblPlants:Bra012967.1-P	EnsemblPlantsGene:Bra012967	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33133	PANTHER:PTHR33133:SF3	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540519	UniProt:M4D907
MapMan:35.2	:	:	:	:	:

Description

AT5G61340 (E=4e-096) | unknown protein

Coordinates

chrA03:-:21275867..21276841

Molecular Weight (calculated)

36025.7 Da

IEP (calculated)

9.308

GRAVY (calculated)

0.422

Length

324 amino acids

Sequence
(BLAST)

001: MKKTMEEPSK IMRRSIYTFL KHYDRATTAA ALVLPFSAAL LLSQPFFSSS SSSLHGKLNM LFRGAGFSSS LDFFNILSLK LSQTLSSSLF TLPFALTFLL
101: FSKAYIIKLL SNSHGDSSLY YFRLLRTYIC NSFFLLSANA SAFALFFVSF NLIESFGLSS RNFYTLFSLS SAIIYSIILA NAFVISNLAL VSSTSSSSGG
201: YTTILKACLL IQGRTSTALA LSLPTNLCLA GVEALFQYRV VSSYYKGDRG ITSIALEGAF IAYLYALFLV LDTIVNYLFY QSCVKNDEDQ RISREDEYSI
301: KIQISETENT KICIKGPKSF QEIL

Best Arabidopsis Sequence Match ( AT5G61340.1 )
(BLAST)

001: MKKTMEDPSK IMRRSIHTFL QNYHRVTTAA AVALPFSAGL LLSQPFFSSS SSTLHMRLNM LFRGAGFSSS HDFFNILSLK LSQTLSSSLF TLPFSLTFLL
101: LSKAYVIKLL SNNHSADSSS VFYLRLLKTY VCNFFFLLSA NASAFALFFL AYNTLEAFGF SSRNFYTFLS LSSAIIYSII IANAFVISNL ALVSSPSSSS
201: GGYTNILKAC LLIRGRNSTA MALALPTNLG LAGVEALFQY RVMRSYYNGD RDIISIALEG TFIAYLYALF LVLDTIVNFL FYQSCIKNEE DQNIGREDEY
301: SIKIQISETE NTKIHIKGSK NLQEIL

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FLJ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.