Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G183300.1 | Wheat | plasma membrane | 98.79 | 98.79 |
| TraesCS2B01G209900.1 | Wheat | plasma membrane | 98.19 | 98.19 |
| Os07t0595900-01 | Rice | endoplasmic reticulum, plasma membrane | 77.95 | 84.31 |
| EER97483 | Sorghum | cytosol, extracellular, plasma membrane | 83.69 | 83.69 |
| Zm00001d022037_P001 | Maize | plasma membrane | 83.08 | 83.08 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 43.81 | 53.31 |
| Bra004384.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.83 | 48.9 |
| CDX95932 | Canola | extracellular, plasma membrane, vacuole | 46.83 | 48.9 |
| CDY40929 | Canola | extracellular, plasma membrane, vacuole | 46.53 | 48.58 |
| VIT_01s0113g00470.t01 | Wine grape | plasma membrane | 46.53 | 44.38 |
| CDX85037 | Canola | plasma membrane | 44.11 | 43.45 |
| AT1G26650.1 | Thale cress | plasma membrane | 43.81 | 43.28 |
| CDY16174 | Canola | plasma membrane | 43.81 | 43.15 |
| AT1G69430.1 | Thale cress | plastid | 45.62 | 43.14 |
| KRH50552 | Soybean | plasma membrane | 46.22 | 42.86 |
| Bra024700.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 43.5 | 42.86 |
| KRG89547 | Soybean | plasma membrane | 46.22 | 42.38 |
| Solyc05g012870.1.1 | Tomato | cytosol, nucleus, plasma membrane | 43.2 | 40.28 |
| PGSC0003DMT400072841 | Potato | cytosol, nucleus, plasma membrane | 43.5 | 40.22 |
| PGSC0003DMT400068981 | Potato | nucleus, peroxisome, plasma membrane | 43.81 | 39.94 |
| Solyc01g010990.2.1 | Tomato | peroxisome | 42.9 | 39.12 |
| TraesCS5D01G116000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 22.05 | 23.25 |
| TraesCS5D01G089200.1 | Wheat | mitochondrion | 22.66 | 22.06 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G191100.1 | EnsemblPlantsGene:TraesCS2D01G191100 | PANTHER:PTHR33133 | PANTHER:PTHR33133:SF1 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:135308791..135309786
Molecular Weight (calculated)
35095.9 Da
IEP (calculated)
7.796
GRAVY (calculated)
0.899
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQPRGGAAA VRLPAMNALE ILRETVRVLR ADPHAFTYVL FLLLCPASGF LLLSAASLEG AVVLPLARRL LVAAASSGVP VTHFVKQLAH HLAATLVAAV
101: VSFPALLTLL LAARAAVAYT VAAVYAGKPL PAADLFLLAR RAWPRLAATY GLSCAAVAAC LATFLGLLVT VCSTLKSMLY PPDIVVCAGL LTVLAFSIVY
201: AHTIIVCSLG GVIAVLEDVA GVNALRRSVQ LMRGQTHVGL LIFLVSTIGL AFVEGLFEHR VKTLSYGDGS SRLWEGPLLI LMYSFVMLID SMMSAVFYFT
301: CRSSSLAILD EEGGSVEEIE MMMDDKSDAV R
101: VSFPALLTLL LAARAAVAYT VAAVYAGKPL PAADLFLLAR RAWPRLAATY GLSCAAVAAC LATFLGLLVT VCSTLKSMLY PPDIVVCAGL LTVLAFSIVY
201: AHTIIVCSLG GVIAVLEDVA GVNALRRSVQ LMRGQTHVGL LIFLVSTIGL AFVEGLFEHR VKTLSYGDGS SRLWEGPLLI LMYSFVMLID SMMSAVFYFT
301: CRSSSLAILD EEGGSVEEIE MMMDDKSDAV R
001: MEMGLSGMMN HGGSNSKLRK FEIESSSSSP SSSSDHKFHS MNALEILRET VRILRYNLGA FMLIALLLIC PVSAILLPNL LVDQSVVNSL TVRLLLVSKS
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
101: SGLPLLPFVR NSCQKFSETA VSSAMCFPLF ITLSLLSRAA VVYSVDCTYS RKKVVVTKFV VIMQRLWKRL VITYLWICTV IVVCLTSFCV FLVAVCSSFY
201: VLGFSPDFNA YGAILVGLVF SVVFANAIII CNTTIVISIL EDVSGPGALV RASDLIKGQT QVGLLIFLGS TIGLTFVEGL FEHRVKSLSY GDGSSRLWEG
301: PLLVVMYSFV VLIDTMMSAV FYFSCRSYSM EAVEALEASG EIVSQDLSLL
Arabidopsis Description
Son of sevenless protein [Source:UniProtKB/TrEMBL;Acc:Q9C794]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.