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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000516.1-P
Bra001461.1-P
Bra001637.1-P
Bra001640.1-P
Bra003487.1-P
Bra003560.1-P
Bra003700.1-P
Bra004000.1-P
Bra004380.1-P
Bra004620.1-P
Bra005738.1-P
Bra006107.1-P
Bra006918.1-P
Bra007663.1-P
Bra008128.1-P
Bra008222.1-P
Bra009543.1-P
Bra010714.1-P
Bra010807.1-P
Bra012809.1-P
Bra013239.1-P
Bra013721.1-P
Bra015088.1-P
Bra015940.1-P
Bra016936.1-P
Bra016962.1-P
Bra018309.1-P
Bra019278.1-P
Bra019280.1-P
Bra021187.1-P
Bra021200.1-P
Bra021415.1-P
Bra021909.1-P
Bra022172.1-P
Bra022176.1-P
Bra022805.1-P
Bra022976.1-P
Bra023336.1-P
Bra024700.1-P
Bra024839.1-P
Bra024840.1-P
Bra025430.1-P
Bra027049.1-P
Bra027341.1-P
Bra028191.1-P
Bra029227.1-P
Bra029884.1-P
Bra029887.1-P
Bra030181.1-P
Bra030182.1-P
Bra031136.1-P
Bra033442.1-P
Bra033483.1-P
Bra033597.1-P
Bra034099.1-P
Bra034157.1-P
Bra034504.1-P
Bra034748.1-P
Bra034927.1-P
Bra035190.1-P
Bra036492.1-P
Bra036669.1-P
Bra038123.1-P
Bra038305.1-P
Bra038442.1-P
Bra038550.1-P
Bra038739.1-P
Bra039670.1-P
Bra039971.1-P
Bra040597.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42580.1 Bra024700.1-P AT1G26650.1 19000166
AT2G42580.1 Bra010807.1-P AT1G29930.1 19000166
AT2G42580.1 Bra021909.1-P AT1G29930.1 19000166
AT2G42580.1 Bra022976.1-P AT1G29930.1 19000166
AT2G42580.1 Bra030181.1-P AT1G29930.1 19000166
AT2G42580.1 Bra030182.1-P AT1G29930.1 19000166
AT2G42580.1 Bra034927.1-P AT1G42970.1 19000166
AT2G42580.1 Bra038123.1-P AT1G53400.1 19000166
AT2G42580.1 Bra039670.1-P AT1G53400.1 19000166
AT2G42580.1 Bra027049.1-P AT1G62380.1 19000166
AT2G42580.1 Bra034504.1-P AT1G62380.1 19000166
AT2G42580.1 Bra004000.1-P AT1G69420.1 19000166
AT2G42580.1 Bra004380.1-P AT1G69420.1 19000166
AT2G42580.1 Bra038305.1-P AT1G69420.1 19000166
AT2G42580.1 Bra008128.1-P AT1G74050.1 19000166
AT2G42580.1 Bra015940.1-P AT1G74050.1 19000166
AT2G42580.1 Bra008222.1-P AT1G75750.1 19000166
AT2G42580.1 Bra029227.1-P AT1G75750.1 19000166
AT2G42580.1 Bra038550.1-P AT1G75750.1 19000166
AT2G42580.1 Bra003700.1-P AT1G76920.1 19000166
AT2G42580.1 Bra003560.1-P AT1G80300.1 19000166
AT2G42580.1 Bra035190.1-P AT1G80300.1 19000166
AT2G42580.1 Bra024839.1-P AT2G01950.1 19000166
AT2G42580.1 Bra024840.1-P AT2G01950.1 19000166
AT2G42580.1 Bra031136.1-P AT2G20670.1 19000166
AT2G42580.1 Bra036492.1-P AT2G20670.1 19000166
AT2G42580.1 Bra000516.1-P AT2G27330.1 19000166
AT2G42580.1 Bra039971.1-P AT2G29340.1 19000166
AT2G42580.1 Bra018309.1-P AT2G30520.1 19000166
AT2G42580.1 Bra022805.1-P AT2G30520.1 19000166
AT2G42580.1 Bra004620.1-P AT2G41410.1 19000166
AT2G42580.1 Bra016936.1-P AT2G41410.1 19000166
AT2G42580.1 Bra021415.1-P AT3G02740.1 19000166
AT2G42580.1 Bra040597.1-P AT3G02740.1 19000166
AT2G42580.1 Bra029884.1-P AT3G10980.1 19000166
AT2G42580.1 Bra029887.1-P AT3G10985.1 19000166
AT2G42580.1 Bra034157.1-P AT3G10985.1 19000166
AT2G42580.1 Bra001461.1-P AT3G12630.1 19000166
AT2G42580.1 Bra034748.1-P AT3G12630.1 19000166
AT2G42580.1 Bra038739.1-P AT3G12630.1 19000166
AT2G42580.1 Bra027341.1-P AT3G14400.1 19000166
AT2G42580.1 Bra001637.1-P AT3G16640.1 19000166
AT2G42580.1 Bra021187.1-P AT3G16640.1 19000166
AT2G42580.1 Bra022172.1-P AT3G16640.1 19000166
AT2G42580.1 Bra001640.1-P AT3G16770.1 19000166
AT2G42580.1 Bra021200.1-P AT3G16770.1 19000166
AT2G42580.1 Bra022176.1-P AT3G16770.1 19000166
AT2G42580.1 Bra013239.1-P AT3G24830.1 19000166
AT2G42580.1 Bra015088.1-P AT3G24830.1 19000166
AT2G42580.1 Bra036669.1-P AT3G24830.1 19000166
AT2G42580.1 Bra019278.1-P AT3G26450.1 19000166
AT2G42580.1 Bra019280.1-P AT3G26450.1 19000166
AT2G42580.1 Bra006918.1-P AT3G52300.1 19000166
AT2G42580.1 Bra012809.1-P AT3G52300.1 19000166
AT2G42580.1 Bra033442.1-P AT3G52300.1 19000166
AT2G42580.1 Bra003487.1-P AT3G62120.1 19000166
AT2G42580.1 Bra007663.1-P AT3G62120.1 19000166
AT2G42580.1 Bra038442.1-P AT4G14130.1 19000166
AT2G42580.1 Bra033483.1-P AT4G14440.1 19000166
AT2G42580.1 Bra013721.1-P AT4G23670.1 19000166
AT2G42580.1 Bra034099.1-P AT4G23670.1 19000166
AT2G42580.1 Bra010714.1-P AT4G39050.1 21798944
AT2G42580.1 Bra033597.1-P AT4G39050.1 21798944
AT2G42580.1 Bra005738.1-P AT5G03230.1 19000166
AT2G42580.1 Bra009543.1-P AT5G03230.1 19000166
AT2G42580.1 Bra006107.1-P AT5G11670.1 19000166
AT2G42580.1 Bra023336.1-P AT5G11670.1 19000166
AT2G42580.1 Bra025430.1-P AT5G38530.1 19000166
AT2G42580.1 Bra028191.1-P AT5G38530.1 19000166
AT2G42580.1 Bra016962.1-P AT5G42440.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55390 Canola cytosol 98.48 96.71
Bra000267.1-P Field mustard cytosol 86.3 84.38
AT2G42580.1 Thale cress cytosol 84.63 80.46
Bra007405.1-P Field mustard cytosol 71.84 70.13
VIT_18s0001g09830.t01 Wine grape cytosol 23.29 57.95
VIT_12s0028g02240.t01 Wine grape cytosol 58.6 54.23
KRH22291 Soybean plastid 47.95 53.94
GSMUA_Achr10P... Banana cytosol 51.75 50.97
Os01t0218200-00 Rice plastid 49.32 48.21
Zm00001d039362_P002 Maize cytosol 49.16 48.21
EES02247 Sorghum plastid 49.92 47.95
TraesCS3B01G162100.1 Wheat cytosol 49.01 47.92
Zm00001d008930_P003 Maize cytosol 49.01 47.7
TraesCS3A01G143000.1 Wheat cytosol 48.4 47.32
TraesCS3D01G144600.1 Wheat cytosol 48.55 47.26
Bra038116.1-P Field mustard cytosol 46.88 46.81
Bra030946.1-P Field mustard cytosol, plastid 47.34 46.42
KRH27037 Soybean nucleus 47.49 46.22
EES01073 Sorghum cytosol 47.79 46.11
GSMUA_Achr7P24480_001 Banana cytosol 45.36 45.92
GSMUA_Achr4P08560_001 Banana cytosol 47.64 45.69
Zm00001d044479_P001 Maize cytosol 47.18 45.52
TraesCS3A01G221800.1 Wheat cytosol 46.58 44.48
TraesCS3B01G251600.1 Wheat cytosol, mitochondrion 46.42 44.33
TraesCS3D01G231300.1 Wheat cytosol, mitochondrion 46.42 44.33
GSMUA_Achr3P25160_001 Banana cytosol 47.95 44.24
HORVU1Hr1G093390.2 Barley cytosol 45.21 44.13
Zm00001d011352_P001 Maize cytosol 45.66 44.05
HORVU3Hr1G027650.2 Barley mitochondrion 44.6 43.99
HORVU3Hr1G054240.2 Barley cytosol, mitochondrion 45.51 43.46
GSMUA_AchrUn_... Banana cytosol 17.66 43.28
Zm00001d004494_P001 Maize cytosol, mitochondrion 14.61 43.24
TraesCS1B01G462300.1 Wheat cytosol 45.66 43.23
TraesCS1A01G427400.1 Wheat cytosol 45.81 43.19
Os05t0210600-01 Rice cytosol 26.33 43.14
Os05t0587300-01 Rice cytosol 36.38 43.06
TraesCS1D01G437100.1 Wheat nucleus 45.66 42.98
OQU78515 Sorghum cytosol 45.36 42.57
GSMUA_AchrUn_... Banana endoplasmic reticulum 32.57 42.54
Bra006046.1-P Field mustard cytosol 24.81 36.55
Bra027292.1-P Field mustard cytosol 40.79 36.51
Bra021583.1-P Field mustard nucleus 41.1 35.71
Bra003657.1-P Field mustard cytosol 24.66 31.64
Bra009058.1-P Field mustard cytosol, mitochondrion 26.03 30.54
Bra015628.1-P Field mustard cytosol 24.35 30.42
Bra024360.1-P Field mustard mitochondrion 26.94 30.2
Bra023793.1-P Field mustard cytosol 18.57 29.61
Bra023795.1-P Field mustard cytosol 3.96 29.55
Bra023794.1-P Field mustard cytosol, nucleus, plastid 14.61 29.45
Zm00001d009724_P009 Maize cytosol 43.07 26.47
Bra032136.1-P Field mustard cytosol 8.98 21.3
Bra028602.1-P Field mustard cytosol 27.7 16.71
Bra011197.1-P Field mustard cytosol 1.67 13.41
Zm00001d006366_P001 Maize cytosol 0.15 0.43
Zm00001d033961_P001 Maize cytosol 0.15 0.43
Protein Annotations
Gene3D:1.25.40.10MapMan:11.3.2.5Gene3D:3.40.30.10EnsemblPlantsGene:Bra004709EnsemblPlants:Bra004709.1EnsemblPlants:Bra004709.1-P
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623GO:GO:0008150
GO:GO:0009987GO:GO:0019725GO:GO:0045454InterPro:IPR011990InterPro:IPR013026InterPro:IPR013766
InterPro:IPR019734UniProt:M4CKH4PFAM:PF00085PFAM:PF00515PFAM:PF13174PFAM:PF13432
PFscan:PS50005PFscan:PS50293PANTHER:PTHR22904PANTHER:PTHR22904:SF374SMART:SM00028SUPFAM:SSF48452
SUPFAM:SSF52833InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_1InterPro:TPR_repeatInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI0002547985SEG:seg:::
Description
AT2G42580 (E=3e-140) TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding
Coordinates
chrA05:+:1447194..1452889
Molecular Weight (calculated)
71885.9 Da
IEP (calculated)
8.894
GRAVY (calculated)
-0.434
Length
657 amino acids
Sequence
(BLAST)
001: MSHSRRLSLE PAITGRFRDS LSLQRHDNDD VINKPDFREL DLGSPVSTLM PRVSTSSAAA TPTSSSGSSG SASGKPSVAG KSHSGEIPGG PGSVMPAVKN
101: LKPDHRRSSS TGKPLIFSGS SFSHSATSHS SATSAVSPSP AVLPAGNICP SGRILKTGMA TRSSTRAETL CTGTGNYGHG NVVRSGGGGS NHSARADGES
201: PEELKRLGND MYRRGNFSEA LSLYDRAISL SPENAAFRSN RAAALTASGR LGEAVKECLE AVRLDPSYSR AHQRLASLYL RLGEAENARR HLCFSGQCPD
301: QTDLQRLQML EKHLRRCWEA RKIGDWRTVV KETDLAIENG ADSSPQLVAC KAEALLRLNQ IEDSDFCISS IPRHDHYYHT QPQAKLFGMV AEAFESGVVK
401: AERAAMLDQT NPELVSVLNN VKMVVKARTR GNELFSSGRY SDASVAYGDG LKQDGSNSVL YCNRAACWYK LGLWEKSVED CNQALKIHPS YIKALLRRAA
501: SYGKLGRWED AVRDYEFVRR ELPGDSEVTE SLESAKIAVM NRSQVSKSFG YNNQVEAVST LDKFKNVVSL PGVSVFHFKS SSNRQCEEIS PFINTLCLRY
601: PLVHFFMVDV EESVALAKAE SIRKVPTFKM YKNGDKVKEM ICPSHQFLED SIKHFLL
Best Arabidopsis Sequence Match ( AT2G42580.1 )
(BLAST)
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.