Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000267.1-P | |
| Bra004709.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G12630.1 | Bra000267.1-P | AT2G42580.1 | 19000166 |
| AT3G12630.1 | Bra004709.1-P | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00788 | Canola | cytosol, nucleus, plastid | 93.08 | 95.48 |
| Bra038739.1-P | Field mustard | nucleus | 86.79 | 88.46 |
| Bra034748.1-P | Field mustard | nucleus | 81.13 | 81.13 |
| AT3G12630.1 | Thale cress | nucleus | 81.13 | 80.62 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 62.89 | 58.14 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 58.49 | 57.76 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 58.49 | 56.71 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 54.09 | 55.48 |
| Solyc01g086960.2.1 | Tomato | nucleus | 64.78 | 54.79 |
| PGSC0003DMT400017570 | Potato | nucleus | 63.52 | 54.01 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 49.06 | 50.32 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 48.43 | 50.0 |
| TraesCS5B01G262900.1 | Wheat | nucleus | 48.43 | 47.53 |
| Bra014276.1-P | Field mustard | cytosol | 23.9 | 47.5 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 47.8 | 47.2 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 48.43 | 46.67 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 47.8 | 46.63 |
| Zm00001d006016_P001 | Maize | nucleus | 47.17 | 46.58 |
| Os09t0486500-02 | Rice | nucleus | 47.17 | 45.73 |
| OQU89687 | Sorghum | nucleus | 49.06 | 45.35 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 48.43 | 45.03 |
| TraesCS7B01G146400.1 | Wheat | nucleus | 48.43 | 45.03 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 47.8 | 44.19 |
| Zm00001d031423_P001 | Maize | cytosol, nucleus, plastid | 47.17 | 42.61 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 47.17 | 42.61 |
| Os08t0504700-01 | Rice | cytosol, nucleus, plastid | 45.28 | 42.35 |
| Bra015203.1-P | Field mustard | plastid | 25.79 | 37.96 |
| Bra026970.1-P | Field mustard | nucleus | 34.59 | 35.48 |
| Bra005282.1-P | Field mustard | nucleus | 35.85 | 35.4 |
| Bra018900.1-P | Field mustard | cytosol, nucleus, plastid | 37.11 | 35.12 |
| Bra014278.1-P | Field mustard | nucleus | 38.99 | 34.83 |
| Bra023061.1-P | Field mustard | cytosol, nucleus, plastid | 34.59 | 34.38 |
| Bra019645.1-P | Field mustard | cytosol, nucleus, plastid | 35.22 | 34.36 |
| Bra010753.1-P | Field mustard | cytosol | 27.04 | 33.08 |
| Bra006949.1-P | Field mustard | cytosol, nucleus, plastid | 36.48 | 32.95 |
| Bra036643.1-P | Field mustard | nucleus | 22.64 | 32.43 |
| Bra019169.1-P | Field mustard | cytosol | 25.79 | 31.3 |
| HORVU5Hr1G072920.1 | Barley | plastid | 48.43 | 30.92 |
| Bra000505.1-P | Field mustard | cytosol, mitochondrion, nucleus | 32.08 | 30.91 |
| Bra028533.1-P | Field mustard | cytosol, nucleus, plastid | 35.85 | 30.48 |
| Bra017832.1-P | Field mustard | nucleus | 24.53 | 30.47 |
| Bra029435.1-P | Field mustard | plastid | 33.33 | 30.29 |
| Bra028223.1-P | Field mustard | nucleus | 24.53 | 30.23 |
| Bra033124.1-P | Field mustard | nucleus, plastid | 32.08 | 29.65 |
| Bra019354.1-P | Field mustard | cytosol, extracellular, nucleus | 32.7 | 17.81 |
| Bra023869.1-P | Field mustard | plastid | 15.72 | 17.12 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | EnsemblPlantsGene:Bra001461 | EnsemblPlants:Bra001461.1 | EnsemblPlants:Bra001461.1-P |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | UniProt:M4CB81 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF22 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0002540801 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
AT3G12630 (E=2e-063) | zinc finger (AN1-like) family protein
Coordinates
chrA03:+:16477410..16477889
Molecular Weight (calculated)
17696.1 Da
IEP (calculated)
9.473
GRAVY (calculated)
-0.641
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRTEKEET EFKVVLETLP TTTTPTLCSN NCGVTASPST NNMCQKCFNA SVSGIDPTPI VKRSARSVSL RSTPARAVIR PRETDPVKRD HHQQTINRCS
101: GCRKKVGLTG FRCRCGDLFC AEHRYSDRHE CSYDYKTAGR EAIARENPVV KAAKMVKLS
101: GCRKKVGLTG FRCRCGDLFC AEHRYSDRHE CSYDYKTAGR EAIARENPVV KAAKMVKLS
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.