Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G12630.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001461.1-P | Field mustard | nucleus | 95.48 | 93.08 |
| CDX73811 | Canola | nucleus | 95.48 | 93.08 |
| CDY50536 | Canola | nucleus | 89.68 | 89.1 |
| CDY52666 | Canola | nucleus | 89.03 | 89.03 |
| CDY08419 | Canola | nucleus | 84.52 | 82.39 |
| AT3G12630.1 | Thale cress | nucleus | 84.52 | 81.88 |
| CDY67538 | Canola | nucleus | 83.87 | 81.76 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 61.29 | 59.01 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 61.29 | 57.93 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 63.23 | 56.98 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 54.84 | 54.84 |
| Solyc01g086960.2.1 | Tomato | nucleus | 66.45 | 54.79 |
| PGSC0003DMT400017570 | Potato | nucleus | 65.16 | 54.01 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 50.32 | 50.32 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 49.68 | 50.0 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 50.32 | 48.45 |
| TraesCS5B01G262900.1 | Wheat | nucleus | 49.68 | 47.53 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 49.68 | 46.67 |
| Zm00001d006016_P001 | Maize | nucleus | 47.74 | 45.96 |
| Os09t0486500-02 | Rice | nucleus | 48.39 | 45.73 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 50.32 | 45.61 |
| TraesCS7B01G146400.1 | Wheat | nucleus | 50.32 | 45.61 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 47.74 | 45.4 |
| OQU89687 | Sorghum | nucleus | 49.68 | 44.77 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 49.68 | 44.77 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 49.03 | 43.18 |
| Zm00001d031423_P001 | Maize | cytosol, nucleus, plastid | 48.39 | 42.61 |
| Os08t0504700-01 | Rice | cytosol, nucleus, plastid | 45.81 | 41.76 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 36.13 | 37.33 |
| CDY60839 | Canola | nucleus, plastid | 39.35 | 37.2 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 39.35 | 36.31 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 39.35 | 36.31 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 34.84 | 36.24 |
| CDX79670 | Canola | nucleus | 34.84 | 35.76 |
| CDY13347 | Canola | nucleus | 35.48 | 35.71 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 35.48 | 35.71 |
| CDY26566 | Canola | nucleus | 35.48 | 35.48 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 36.77 | 34.97 |
| CDY16005 | Canola | nucleus | 35.48 | 34.59 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 36.13 | 34.36 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 35.48 | 34.16 |
| CDY65025 | Canola | cytosol | 28.39 | 33.85 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 34.84 | 33.75 |
| CDY04388 | Canola | cytosol | 14.84 | 33.33 |
| CDY00455 | Canola | cytosol | 14.84 | 33.33 |
| CDX90265 | Canola | cytosol | 27.74 | 33.08 |
| CDY49709 | Canola | cytosol | 27.1 | 32.06 |
| CDY57287 | Canola | cytosol | 27.74 | 31.62 |
| CDX94483 | Canola | plastid | 32.9 | 31.29 |
| CDX86725 | Canola | nucleus, plastid | 32.9 | 31.29 |
| CDX92701 | Canola | cytosol | 27.1 | 31.11 |
| HORVU5Hr1G072920.1 | Barley | plastid | 49.68 | 30.92 |
| CDY39818 | Canola | nucleus | 21.94 | 30.63 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 31.61 | 29.52 |
| CDY03251 | Canola | nucleus | 26.45 | 29.08 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 31.61 | 28.99 |
| CDY51557 | Canola | nucleus | 33.55 | 23.96 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 34.19 | 18.15 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078EMV4 | InterPro:AN1-like_Znf | EnsemblPlants:CDY00788 | ProteinID:CDY00788 |
| ProteinID:CDY00788.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00110682001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF22 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EF3140 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaC03g37720D
Coordinates
chrLK031921:+:1138412..1139516
Molecular Weight (calculated)
17215.5 Da
IEP (calculated)
9.464
GRAVY (calculated)
-0.725
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRTEKEET EFKVLETLTT TTTPTLCSNN CGVTASPSTN NMCQKCFNAG IDPTPIAKRS ARSVSLRSTP AKAAIRPRET DPVKRDHHQQ TVNRCSGCRK
101: KVGLTGFRCR CGDLFCAEHR YSDRHDCSYD YKTAGREAIA RENPVVKAAK MVKLS
101: KVGLTGFRCR CGDLFCAEHR YSDRHDCSYD YKTAGREAIA RENPVVKAAK MVKLS
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.