CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036643.1-P	Field mustard	nucleus	100.0	100.0
CDY03251	Canola	nucleus	94.59	74.47
VIT_02s0025g05080.t01	Wine grape	cytosol	44.14	49.0
KRH57322	Soybean	cytosol, extracellular, nucleus	52.25	47.15
KRH04053	Soybean	cytosol	50.45	43.41
CDY26566	Canola	nucleus	54.95	39.35
CDY16005	Canola	nucleus	54.95	38.36
VIT_02s0025g05050.t01	Wine grape	nucleus	57.66	37.21
CDX86725	Canola	nucleus, plastid	54.05	36.81
CDX94483	Canola	plastid	54.05	36.81
CDX84135	Canola	cytosol, nucleus, plastid	48.65	36.24
CDX67537	Canola	cytosol, nucleus, plastid	46.85	34.67
CDX79670	Canola	nucleus	45.95	33.77
CDX95378	Canola	cytosol, nucleus, plastid	46.85	33.77
CDY13347	Canola	nucleus	46.85	33.77
CDX75051	Canola	cytosol, nucleus, plastid	48.65	33.13
CDX73602	Canola	cytosol, nucleus, plastid	46.85	32.3
CDY49709	Canola	cytosol	37.84	32.06
CDY66222	Canola	cytosol, nucleus, plastid	46.85	31.9
CDX84565	Canola	cytosol, nucleus, plastid	45.95	31.88
CDY57287	Canola	cytosol	37.84	30.88
CDY31184	Canola	cytosol, mitochondrion, nucleus	46.85	30.77
Solyc08g079700.1.1	Tomato	cytosol	45.05	30.3
CDX83273	Canola	cytosol, mitochondrion, nucleus	44.14	29.52
PGSC0003DMT400010084	Potato	cytosol	43.24	28.92
CDX92701	Canola	cytosol	35.14	28.89
CDX90265	Canola	cytosol	33.33	28.46
CDY65025	Canola	cytosol	33.33	28.46
CDY51557	Canola	nucleus	52.25	26.73
CDY60839	Canola	nucleus, plastid	38.74	26.22
CDY25219	Canola	cytosol, nucleus, plastid	38.74	25.6
CDY22831	Canola	cytosol, nucleus, plastid	38.74	25.6
CDY08419	Canola	nucleus	33.33	23.27
CDY04388	Canola	cytosol	14.41	23.19
CDY00455	Canola	cytosol	14.41	23.19
CDY67538	Canola	nucleus	32.43	22.64
CDX73811	Canola	nucleus	32.43	22.64
CDY52666	Canola	nucleus	31.53	22.58
CDY50536	Canola	nucleus	31.53	22.44
CDY00788	Canola	cytosol, nucleus, plastid	30.63	21.94
CDX98772	Canola	cytosol, extracellular, nucleus	48.65	18.49

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	GO:A0A078HST9	UniProt:A0A078HST9	InterPro:AN1-like_Znf	EnsemblPlants:CDY39818
ProteinID:CDY39818	ProteinID:CDY39818.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00068632001	InterPro:IPR000058	InterPro:IPR035896	PFAM:PF01428	PFscan:PS51039	PANTHER:PTHR10634
PANTHER:PTHR10634:SF38	SMART:SM00154	SUPFAM:SSF118310	UniParc:UPI0002541A09	InterPro:Znf_AN1	SEG:seg

Description

BnaA09g10700DBnaA09g10700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HST9]

Coordinates

chrLK032457:-:302110..302445

Molecular Weight (calculated)

12183.3 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.674

Length

111 amino acids

Sequence
(BLAST)

001: MNLCSKCYHD LRVTQEASFE PETSLESALA SSSSSSESSG TAAQTSAKTR RCLSCNKKVG LMGFKCKCGS TFCGDHRYPE NHECEFDFRG QGRDAISKAN
101: PLVKGEKVKR F

Best Arabidopsis Sequence Match ( AT1G12440.1 )
(BLAST)

001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI

Arabidopsis Description

SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.