Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79670 | Canola | nucleus | 85.23 | 84.11 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 90.6 | 82.82 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 83.22 | 77.5 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 74.5 | 74.0 |
| CDY13347 | Canola | nucleus | 75.84 | 73.38 |
| AT2G36320.1 | Thale cress | cytosol, nucleus, plastid | 78.52 | 72.67 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 74.5 | 72.08 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 75.84 | 69.33 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 69.8 | 64.6 |
| GSMUA_Achr3P22730_001 | Banana | cytosol, mitochondrion, nucleus | 54.36 | 59.56 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 53.69 | 55.56 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 58.39 | 54.04 |
| KRH67896 | Soybean | cytosol, nucleus, plastid | 55.03 | 51.25 |
| KRG96184 | Soybean | cytosol, nucleus, plastid | 55.7 | 50.61 |
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 51.01 | 50.33 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 50.34 | 50.0 |
| CDY39818 | Canola | nucleus | 36.24 | 48.65 |
| CDY03251 | Canola | nucleus | 45.64 | 48.23 |
| KRH30848 | Soybean | nucleus | 55.03 | 47.67 |
| KRH32726 | Soybean | cytosol, nucleus, plastid | 56.38 | 47.46 |
| Os02t0530300-01 | Rice | cytosol, nucleus, plastid | 47.65 | 46.1 |
| CDY26566 | Canola | nucleus | 47.65 | 45.81 |
| CDY16005 | Canola | nucleus | 47.65 | 44.65 |
| KRH30019 | Soybean | cytosol | 40.94 | 42.66 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 46.98 | 42.17 |
| PGSC0003DMT400050131 | Potato | cytosol, nucleus, plastid | 51.68 | 42.08 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 47.65 | 42.01 |
| CDX94483 | Canola | plastid | 44.97 | 41.1 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 46.31 | 41.07 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 46.31 | 41.07 |
| CDX86725 | Canola | nucleus, plastid | 44.3 | 40.49 |
| CDY60839 | Canola | nucleus, plastid | 43.62 | 39.63 |
| CDY65025 | Canola | cytosol | 32.21 | 36.92 |
| CDX90265 | Canola | cytosol | 32.21 | 36.92 |
| CDY57287 | Canola | cytosol | 33.56 | 36.76 |
| CDY49709 | Canola | cytosol | 31.54 | 35.88 |
| CDY08419 | Canola | nucleus | 38.26 | 35.85 |
| CDY67538 | Canola | nucleus | 37.58 | 35.22 |
| CDY52666 | Canola | nucleus | 36.24 | 34.84 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 36.24 | 34.84 |
| CDY50536 | Canola | nucleus | 36.24 | 34.62 |
| CDX92701 | Canola | cytosol | 30.87 | 34.07 |
| CDX73811 | Canola | nucleus | 36.24 | 33.96 |
| CDY04388 | Canola | cytosol | 14.77 | 31.88 |
| CDY00455 | Canola | cytosol | 14.77 | 31.88 |
| EES03677 | Sorghum | peroxisome, plastid | 36.91 | 31.43 |
| CDY51557 | Canola | nucleus | 42.95 | 29.49 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 43.62 | 22.26 |
| Os01t0765900-00 | Rice | nucleus | 44.97 | 18.87 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078D4S0 | InterPro:AN1-like_Znf | EnsemblPlants:CDX84135 | ProteinID:CDX84135 |
| ProteinID:CDX84135.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00141145001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF43 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EE979E | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaC04g08970D
Coordinates
chrLK031836:-:87825..88847
Molecular Weight (calculated)
16182.3 Da
IEP (calculated)
8.565
GRAVY (calculated)
-0.452
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEHRCQTP EGHRLCVNNC GFSGSSATMN LCSNCYGDLC LNQQQASSLP AASPPSSSKI ESISSSSTAE RQIKLIPSEQ QQPPQRPNRC TVCRKRVGLA
101: GFMCRCGTTF CGTHRYPEVH GCTFDFKSAG REEIAKANPL VIAAKLKKI
101: GFMCRCGTTF CGTHRYPEVH GCTFDFKSAG REEIAKANPL VIAAKLKKI
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.