Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr5P06970_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27580.1 | GSMUA_Achr5P06970_001 | AT3G61790.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 84.56 | 76.16 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 68.38 | 64.58 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 66.18 | 60.0 |
| Os02t0530300-01 | Rice | cytosol, nucleus, plastid | 66.18 | 58.44 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 63.97 | 58.0 |
| CDX79670 | Canola | nucleus | 63.24 | 56.95 |
| CDY13347 | Canola | nucleus | 63.24 | 55.84 |
| KRH67896 | Soybean | cytosol, nucleus, plastid | 65.44 | 55.62 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 64.71 | 54.66 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 61.76 | 54.55 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 59.56 | 54.36 |
| KRG96184 | Soybean | cytosol, nucleus, plastid | 64.71 | 53.66 |
| Bra023061.1-P | Field mustard | cytosol, nucleus, plastid | 62.5 | 53.12 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 62.5 | 53.12 |
| AT2G36320.1 | Thale cress | cytosol, nucleus, plastid | 62.5 | 52.8 |
| Bra005282.1-P | Field mustard | nucleus | 62.5 | 52.8 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 63.24 | 52.76 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 62.5 | 52.15 |
| Bra019645.1-P | Field mustard | cytosol, nucleus, plastid | 62.5 | 52.15 |
| Solyc10g083460.1.1 | Tomato | nucleus, peroxisome, plastid | 60.29 | 51.57 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 61.03 | 51.55 |
| KRH26620 | Soybean | nucleus | 59.56 | 51.27 |
| PGSC0003DMT400072393 | Potato | cytosol, nucleus, peroxisome | 58.82 | 50.31 |
| Bra006949.1-P | Field mustard | cytosol, nucleus, plastid | 63.97 | 49.43 |
| AT3G52800.2 | Thale cress | nucleus | 61.03 | 48.82 |
| KRH32726 | Soybean | cytosol, nucleus, plastid | 63.24 | 48.59 |
| PGSC0003DMT400006957 | Potato | cytosol | 52.94 | 48.0 |
| KRH30848 | Soybean | nucleus | 60.29 | 47.67 |
| Solyc09g009590.1.1 | Tomato | cytosol | 51.47 | 46.36 |
| GSMUA_Achr9P27570_001 | Banana | cytosol, mitochondrion, nucleus | 37.5 | 45.95 |
| GSMUA_Achr7P06320_001 | Banana | cytosol | 49.26 | 45.89 |
| GSMUA_Achr1P19600_001 | Banana | cytosol | 47.79 | 45.77 |
| Bra028533.1-P | Field mustard | cytosol, nucleus, plastid | 62.5 | 45.45 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus, plastid | 33.09 | 45.45 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 47.06 | 45.39 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 46.32 | 44.68 |
| PGSC0003DMT400050131 | Potato | cytosol, nucleus, plastid | 59.56 | 44.26 |
| AT2G27580.1 | Thale cress | cytosol, mitochondrion, nucleus | 52.94 | 44.17 |
| GSMUA_Achr2P12750_001 | Banana | nucleus, peroxisome, plastid | 54.41 | 43.79 |
| GSMUA_Achr7P01460_001 | Banana | cytosol, nucleus, plastid | 53.68 | 43.2 |
| KRH30019 | Soybean | cytosol | 44.12 | 41.96 |
| GSMUA_Achr9P22330_001 | Banana | cytosol | 50.0 | 41.46 |
| KRH01118 | Soybean | cytosol | 44.85 | 40.94 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 46.32 | 40.65 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 46.32 | 40.65 |
| Bra000505.1-P | Field mustard | cytosol, mitochondrion, nucleus | 49.26 | 40.61 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 49.26 | 40.36 |
| GSMUA_Achr3P11830_001 | Banana | plastid | 29.41 | 39.22 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 48.53 | 39.05 |
| EES03677 | Sorghum | peroxisome, plastid | 45.59 | 35.43 |
| GSMUA_Achr5P25610_001 | Banana | plastid | 36.03 | 33.79 |
| GSMUA_Achr3P19340_001 | Banana | nucleus | 33.09 | 30.82 |
| GSMUA_Achr9P07860_001 | Banana | nucleus | 34.56 | 30.72 |
| GSMUA_Achr11P... | Banana | nucleus | 34.56 | 30.13 |
| Os01t0765900-00 | Rice | nucleus | 52.94 | 20.28 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr3G22730_001 | EnsemblPlants:GSMUA_Achr3P22730_001 | EnsemblPlants:GSMUA_Achr3T22730_001 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | UniProt:M0SGY9 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI000296B8CA | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22730_001]
Coordinates
chr3:-:23586981..23587741
Molecular Weight (calculated)
14759.7 Da
IEP (calculated)
9.088
GRAVY (calculated)
-0.463
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQRCQDG HRLCANNCGF FGSPATLNLC SKCYRDLRLK EEQAASAMIA VERSLSPPPP SAAASSAAPP ARRPNRCASC RKKVGLTGFP CRCGATYCGE
101: HRYPERHACS FDYKAAGREA IALANPIVKA DKLRKI
101: HRYPERHACS FDYKAAGREA IALANPIVKA DKLRKI
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.