Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P12750_001 | Banana | nucleus, peroxisome, plastid | 78.11 | 78.11 |
| GSMUA_Achr3P22730_001 | Banana | cytosol, mitochondrion, nucleus | 43.2 | 53.68 |
| TraesCS2A01G239100.1 | Wheat | peroxisome | 50.3 | 53.46 |
| TraesCS2B01G262800.1 | Wheat | peroxisome | 49.7 | 52.83 |
| GSMUA_Achr1P19600_001 | Banana | cytosol | 42.6 | 50.7 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus, plastid | 29.59 | 50.51 |
| Os07t0168800-01 | Rice | nucleus, peroxisome, plastid | 47.93 | 50.31 |
| GSMUA_Achr7P06320_001 | Banana | cytosol | 43.2 | 50.0 |
| TraesCS2D01G246800.2 | Wheat | peroxisome | 49.7 | 49.41 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 42.01 | 49.31 |
| Os03t0792900-01 | Rice | nucleus, peroxisome, plastid | 46.15 | 48.75 |
| TraesCS5D01G437800.1 | Wheat | mitochondrion, nucleus, peroxisome | 42.01 | 48.3 |
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 42.6 | 47.68 |
| GSMUA_Achr9P22330_001 | Banana | cytosol | 45.56 | 46.95 |
| KXG34474 | Sorghum | nucleus, peroxisome, plastid | 47.34 | 46.51 |
| HORVU5Hr1G104240.1 | Barley | nucleus, peroxisome, plastid | 43.79 | 45.96 |
| TraesCS5A01G429800.1 | Wheat | nucleus, peroxisome, plastid | 43.2 | 45.34 |
| GSMUA_Achr9P27570_001 | Banana | cytosol, mitochondrion, nucleus | 29.59 | 45.05 |
| GSMUA_Achr3P11830_001 | Banana | plastid | 25.44 | 42.16 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 34.91 | 41.84 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 34.32 | 41.13 |
| OQU88500 | Sorghum | mitochondrion | 42.6 | 38.5 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 34.32 | 37.42 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 33.73 | 36.77 |
| GSMUA_Achr5P25610_001 | Banana | plastid | 28.4 | 33.1 |
| GSMUA_Achr3P19340_001 | Banana | nucleus | 26.04 | 30.14 |
| GSMUA_Achr11P... | Banana | nucleus | 27.81 | 30.13 |
| GSMUA_Achr9P07860_001 | Banana | nucleus | 27.22 | 30.07 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G01460_001 | EnsemblPlants:GSMUA_Achr7P01460_001 | EnsemblPlants:GSMUA_Achr7T01460_001 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | UniProt:M0TDT6 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF66 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI000296CCD9 | InterPro:Znf_A20 | InterPro:Znf_AN1 | : |
Description
Zinc finger A20 and AN1 domain-containing stress-associated protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr7G01460_001]
Coordinates
chr7:-:1162766..1164348
Molecular Weight (calculated)
18839.6 Da
IEP (calculated)
7.761
GRAVY (calculated)
-0.517
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQESWKKET DQTECETPEG PILCANNCGF FGSAMTNNLC SKCYKDLVMK HKSMVTLSVT ESGKMTVIPS SSVQIEPTVE VLDKISGPCE VNMVKDRVED
101: SCNKQPANRC FQCKKRVGLT GFKCRCSSTF CSAHRYPETH ECSFDYKTAG REAISKENPV VKAEKIEKI
101: SCNKQPANRC FQCKKRVGLT GFKCRCSSTF CSAHRYPETH ECSFDYKTAG REAISKENPV VKAEKIEKI
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.