Factsheet for GSMUA_Achr9P19860_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12630.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT3G12630.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT3G12630.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT3G12630.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT3G12630.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT3G12630.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11070_001	Banana	nucleus	76.13	76.13
VIT_18s0001g00430.t01	Wine grape	nucleus	23.87	55.22
VIT_18s0001g01260.t01	Wine grape	nucleus	23.87	55.22
Zm00001d020926_P001	Maize	cytosol, nucleus, plastid	57.42	54.6
TraesCS5A01G263500.1	Wheat	cytosol	54.19	54.55
CDY52666	Canola	nucleus	52.9	52.9
Zm00001d006016_P001	Maize	nucleus	54.84	52.8
Bra038739.1-P	Field mustard	nucleus	52.9	52.56
CDY50536	Canola	nucleus	52.9	52.56
AT3G12630.1	Thale cress	nucleus	54.19	52.5
TraesCS5B01G262900.1	Wheat	nucleus	54.19	51.85
HORVU7Hr1G050270.1	Barley	nucleus	53.55	51.55
OQU89687	Sorghum	nucleus	56.77	51.16
CDY67538	Canola	nucleus	52.26	50.94
Bra034748.1-P	Field mustard	nucleus	52.26	50.94
TraesCS5D01G271100.1	Wheat	nucleus	54.19	50.91
Os09t0486500-02	Rice	nucleus	53.55	50.61
OQU80949	Sorghum	cytosol, nucleus, plastid	57.42	50.57
CDY00788	Canola	cytosol, nucleus, plastid	50.32	50.32
CDY08419	Canola	nucleus	51.61	50.31
KRH13914	Soybean	cytosol, nucleus, plastid	52.26	50.31
TraesCS7A01G245100.1	Wheat	nucleus	55.48	50.29
VIT_13s0064g01220.t01	Wine grape	nucleus	55.48	50.0
Zm00001d031423_P001	Maize	cytosol, nucleus, plastid	56.77	50.0
TraesCS7B01G146400.1	Wheat	nucleus	54.84	49.71
CDX73811	Canola	nucleus	50.97	49.69
Os08t0504700-01	Rice	cytosol, nucleus, plastid	54.19	49.41
KRH43492	Soybean	cytosol, nucleus, plastid	52.26	49.39
Bra001461.1-P	Field mustard	nucleus	50.32	49.06
TraesCS7D01G243700.1	Wheat	nucleus	54.19	48.84
KRH20843	Soybean	plastid	42.58	48.18
Solyc01g086960.2.1	Tomato	nucleus	58.06	47.87
PGSC0003DMT400017570	Potato	nucleus	57.42	47.59
KRH27497	Soybean	cytosol, nucleus, plastid	41.29	47.41
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	40.65	46.32
GSMUA_Achr7P06320_001	Banana	cytosol	41.94	44.52
GSMUA_Achr1P19600_001	Banana	cytosol	40.0	43.66
GSMUA_Achr6P17330_001	Banana	nucleus	40.0	43.06
GSMUA_AchrUn_...	Banana	cytosol, extracellular, nucleus, plastid	27.1	42.42
VIT_06s0004g01790.t01	Wine grape	nucleus	38.71	42.25
GSMUA_Achr8P07710_001	Banana	cytosol, mitochondrion, nucleus	40.65	41.72
GSMUA_Achr3P11830_001	Banana	plastid	27.1	41.18
GSMUA_Achr9P27570_001	Banana	cytosol, mitochondrion, nucleus	29.03	40.54
GSMUA_Achr5P25610_001	Banana	plastid	36.77	39.31
PGSC0003DMT400061226	Potato	cytosol, nucleus, plastid	39.35	38.36
Solyc12g100060.1.1	Tomato	cytosol, nucleus, plastid	39.35	38.12
GSMUA_Achr11P...	Banana	nucleus	38.06	37.82
GSMUA_Achr9P22330_001	Banana	cytosol	40.0	37.8
GSMUA_Achr9P07860_001	Banana	nucleus	34.84	35.29
GSMUA_Achr9P17970_001	Banana	cytosol, mitochondrion, nucleus	31.61	34.75
GSMUA_Achr3P19340_001	Banana	nucleus	32.26	34.25
HORVU5Hr1G072920.1	Barley	plastid	54.19	33.73
GSMUA_Achr7P01460_001	Banana	cytosol, nucleus, plastid	36.77	33.73
GSMUA_Achr2P12750_001	Banana	nucleus, peroxisome, plastid	36.77	33.73
GSMUA_Achr9P07600_001	Banana	nucleus	30.32	33.33

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0008270	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr9G19860_001	EnsemblPlants:GSMUA_Achr9P19860_001	EnsemblPlants:GSMUA_Achr9T19860_001
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M0U1U5	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF22	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI0002958DA6	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19860_001]

Coordinates

chr9:+:22551840..22552307

Molecular Weight (calculated)

16753.9 Da

IEP (calculated)

8.783

GRAVY (calculated)

-0.480

Length

155 amino acids

Sequence
(BLAST)

001: MAQREEKEME LHAHESLALC INNCGFPGDP ATNNMCQTCF QASPAAASSS LPRSCSRRSA PSIRSPDPAD RAEEQGAPTA ALASPAPAPA RKVNRCLSCR
101: KRVGFTGFRC RCGELFCGEH RYSDRHDCGY DYKAAARAAI ARANPIVRAA KIVRV

Best Arabidopsis Sequence Match ( AT3G12630.1 )
(BLAST)

001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV

Arabidopsis Description

SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.