Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G271100.1 | Wheat | nucleus | 99.38 | 97.58 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 90.12 | 94.81 |
| Os09t0486500-02 | Rice | nucleus | 75.93 | 75.0 |
| Zm00001d006016_P001 | Maize | nucleus | 66.05 | 66.46 |
| TraesCS7B01G146400.1 | Wheat | nucleus | 68.52 | 64.91 |
| OQU89687 | Sorghum | nucleus | 68.52 | 64.53 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 64.2 | 63.8 |
| HORVU5Hr1G072920.1 | Barley | plastid | 94.44 | 61.45 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 55.56 | 58.06 |
| VIT_18s0001g00430.t01 | Wine grape | nucleus | 23.46 | 56.72 |
| VIT_18s0001g01260.t01 | Wine grape | nucleus | 23.46 | 56.72 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 51.85 | 54.19 |
| CDY52666 | Canola | nucleus | 48.15 | 50.32 |
| CDY50536 | Canola | nucleus | 48.15 | 50.0 |
| Bra038739.1-P | Field mustard | nucleus | 48.15 | 50.0 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 47.53 | 49.68 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 48.77 | 49.07 |
| CDY67538 | Canola | nucleus | 48.15 | 49.06 |
| CDY08419 | Canola | nucleus | 48.15 | 49.06 |
| CDX73811 | Canola | nucleus | 48.15 | 49.06 |
| Bra034748.1-P | Field mustard | nucleus | 48.15 | 49.06 |
| AT3G12630.1 | Thale cress | nucleus | 48.15 | 48.75 |
| Bra001461.1-P | Field mustard | nucleus | 47.53 | 48.43 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 48.77 | 48.17 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 50.0 | 47.09 |
| KRH20843 | Soybean | plastid | 39.51 | 46.72 |
| KRH27497 | Soybean | cytosol, nucleus, plastid | 38.27 | 45.93 |
| Solyc01g086960.2.1 | Tomato | nucleus | 51.23 | 44.15 |
| PGSC0003DMT400017570 | Potato | nucleus | 50.0 | 43.32 |
| TraesCS2B01G262800.1 | Wheat | peroxisome | 40.12 | 40.88 |
| TraesCS3B01G275100.1 | Wheat | cytosol | 34.57 | 40.0 |
| VIT_06s0004g01790.t01 | Wine grape | nucleus | 33.95 | 38.73 |
| PGSC0003DMT400061226 | Potato | cytosol, nucleus, plastid | 37.04 | 37.74 |
| Solyc12g100060.1.1 | Tomato | cytosol, nucleus, plastid | 37.04 | 37.5 |
| TraesCS2B01G235600.1 | Wheat | peroxisome | 31.48 | 37.5 |
| TraesCS2B01G235400.1 | Wheat | peroxisome | 31.48 | 37.5 |
| TraesCS2B01G277500.1 | Wheat | cytosol, nucleus, peroxisome | 31.48 | 36.96 |
| TraesCS7B01G303900.1 | Wheat | cytosol | 37.65 | 36.09 |
| TraesCS5B01G430200.1 | Wheat | nucleus | 33.33 | 35.76 |
| TraesCS2B01G153100.1 | Wheat | peroxisome | 33.33 | 35.06 |
| TraesCS5B01G432700.1 | Wheat | nucleus | 33.95 | 33.95 |
| TraesCS5B01G430300.1 | Wheat | nucleus | 36.42 | 33.33 |
| TraesCS2B01G153200.1 | Wheat | peroxisome | 31.48 | 32.9 |
| TraesCS2B01G153000.1 | Wheat | nucleus | 32.1 | 32.7 |
| TraesCS2B01G153400.1 | Wheat | peroxisome | 32.1 | 32.5 |
| TraesCS6B01G192900.1 | Wheat | extracellular | 38.27 | 32.29 |
| TraesCS2B01G153300.1 | Wheat | peroxisome | 31.48 | 31.88 |
| TraesCS6B01G448700.1 | Wheat | peroxisome | 33.33 | 31.76 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 |
| PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF64 | SMART:SM00154 |
| SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | EnsemblPlantsGene:TraesCS5B01G262900 | EnsemblPlants:TraesCS5B01G262900.1 | InterPro:Znf_A20 |
| InterPro:Znf_AN1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:447402740..447403228
Molecular Weight (calculated)
17449.6 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.540
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRDHKQEE PTELRAPEIT LCANSCGFPG NPATQNLCQN CFLAGPASTS PSSSSSSLPG VSAPTPVIDR PRPAPLEAEL ARPAVDRAPA TEAKPARTSV
101: NRCSSCRKRV GLTGFRCRCG DMFCGEHRYS DRHGCSYDYK AAARDAIARD NPVVRAAKIV RF
101: NRCSSCRKRV GLTGFRCRCG DMFCGEHRYS DRHGCSYDYK AAARDAIARD NPVVRAAKIV RF
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.