Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G12630.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038739.1-P | Field mustard | nucleus | 100.0 | 99.36 |
| CDY50536 | Canola | nucleus | 100.0 | 99.36 |
| AT3G12630.1 | Thale cress | nucleus | 92.9 | 90.0 |
| CDY67538 | Canola | nucleus | 91.61 | 89.31 |
| CDY08419 | Canola | nucleus | 91.61 | 89.31 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 89.03 | 89.03 |
| CDX73811 | Canola | nucleus | 87.74 | 85.53 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 63.23 | 60.87 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 63.23 | 59.76 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 65.81 | 59.3 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 58.06 | 58.06 |
| Solyc01g086960.2.1 | Tomato | nucleus | 69.03 | 56.91 |
| PGSC0003DMT400017570 | Potato | nucleus | 67.74 | 56.15 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 52.9 | 52.9 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 50.32 | 50.65 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 50.32 | 48.45 |
| TraesCS5B01G262900.1 | Wheat | nucleus | 50.32 | 48.15 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 50.32 | 47.85 |
| Zm00001d006016_P001 | Maize | nucleus | 49.68 | 47.83 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 50.32 | 47.27 |
| Os09t0486500-02 | Rice | nucleus | 49.68 | 46.95 |
| OQU89687 | Sorghum | nucleus | 51.61 | 46.51 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 50.32 | 45.61 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 50.32 | 45.35 |
| TraesCS7B01G146400.1 | Wheat | nucleus | 49.68 | 45.03 |
| Os08t0504700-01 | Rice | cytosol, nucleus, plastid | 47.74 | 43.53 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 48.39 | 42.61 |
| Zm00001d031423_P001 | Maize | cytosol, nucleus, plastid | 47.74 | 42.05 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 36.77 | 38.0 |
| CDY60839 | Canola | nucleus, plastid | 39.35 | 37.2 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 36.77 | 37.01 |
| CDX79670 | Canola | nucleus | 35.48 | 36.42 |
| CDY13347 | Canola | nucleus | 36.13 | 36.36 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 39.35 | 36.31 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 39.35 | 36.31 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 34.84 | 36.24 |
| CDY26566 | Canola | nucleus | 36.13 | 36.13 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 37.42 | 35.58 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 36.13 | 34.78 |
| CDY65025 | Canola | cytosol | 29.03 | 34.62 |
| CDY16005 | Canola | nucleus | 35.48 | 34.59 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 35.48 | 34.38 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 36.13 | 34.36 |
| CDX90265 | Canola | cytosol | 28.39 | 33.85 |
| CDY04388 | Canola | cytosol | 14.84 | 33.33 |
| CDY00455 | Canola | cytosol | 14.84 | 33.33 |
| CDY49709 | Canola | cytosol | 27.1 | 32.06 |
| CDY57287 | Canola | cytosol | 27.74 | 31.62 |
| CDY39818 | Canola | nucleus | 22.58 | 31.53 |
| HORVU5Hr1G072920.1 | Barley | plastid | 50.32 | 31.33 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 32.9 | 30.72 |
| CDY03251 | Canola | nucleus | 27.74 | 30.5 |
| CDX92701 | Canola | cytosol | 26.45 | 30.37 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 32.9 | 30.18 |
| CDX94483 | Canola | plastid | 31.61 | 30.06 |
| CDX86725 | Canola | nucleus, plastid | 31.61 | 30.06 |
| CDY51557 | Canola | nucleus | 32.9 | 23.5 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 32.9 | 17.47 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078IS35 | UniProt:A0A078IS35 | InterPro:AN1-like_Znf | EnsemblPlants:CDY52666 |
| ProteinID:CDY52666 | ProteinID:CDY52666.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00007558001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 |
| PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF22 |
| SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EB5B87 | InterPro:Znf_A20 |
| InterPro:Znf_AN1 | : | : | : | : | : |
Description
BnaC01g38560DBnaC01g38560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS35]
Coordinates
chrLK033115:+:28125..29181
Molecular Weight (calculated)
17165.6 Da
IEP (calculated)
9.463
GRAVY (calculated)
-0.540
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRTEKEET EFKVLETLTT TPTLCSNNCG VTANPATNNM CQKCFNASVA AAGVDSTSIL KRSARSVNLR STPAKVVIRP REIDPVKRDQ QTINRCSGCR
101: KKVGLTGFRC RCGDLFCAEH RYSDRHDCSY DYKTAGREAI ARENPVVKAA KMVKV
101: KKVGLTGFRC RCGDLFCAEH RYSDRHDCSY DYKTAGREAI ARENPVVKAA KMVKV
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.