Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019354.1-P | Field mustard | cytosol, extracellular, nucleus | 99.66 | 99.66 |
| AT4G22820.2 | Thale cress | cytosol, nucleus, plastid | 51.03 | 84.66 |
| CDX86725 | Canola | nucleus, plastid | 40.41 | 72.39 |
| CDX94483 | Canola | plastid | 40.07 | 71.78 |
| CDY26566 | Canola | nucleus | 33.9 | 63.87 |
| CDY16005 | Canola | nucleus | 33.9 | 62.26 |
| CDY03251 | Canola | nucleus | 26.71 | 55.32 |
| CDY51557 | Canola | nucleus | 41.1 | 55.3 |
| CDY04388 | Canola | cytosol | 13.01 | 55.07 |
| CDY00455 | Canola | cytosol | 12.33 | 52.17 |
| CDY39818 | Canola | nucleus | 18.49 | 48.65 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 24.66 | 48.0 |
| CDX79670 | Canola | nucleus | 24.32 | 47.02 |
| CDY13347 | Canola | nucleus | 24.66 | 46.75 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 24.66 | 44.72 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 23.97 | 43.75 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 22.26 | 43.62 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 24.32 | 43.56 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 22.95 | 43.51 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 23.97 | 42.94 |
| CDY65025 | Canola | cytosol | 18.15 | 40.77 |
| CDX90265 | Canola | cytosol | 18.15 | 40.77 |
| CDY49709 | Canola | cytosol | 18.15 | 40.46 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 22.6 | 39.76 |
| CDY57287 | Canola | cytosol | 17.81 | 38.24 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 21.92 | 38.1 |
| CDY60839 | Canola | nucleus, plastid | 21.23 | 37.8 |
| CDX92701 | Canola | cytosol | 17.47 | 37.78 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 21.58 | 37.5 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 21.58 | 37.28 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 18.15 | 34.19 |
| CDY52666 | Canola | nucleus | 17.47 | 32.9 |
| CDX73811 | Canola | nucleus | 17.81 | 32.7 |
| CDY50536 | Canola | nucleus | 17.47 | 32.69 |
| CDY08419 | Canola | nucleus | 17.12 | 31.45 |
| CDY67538 | Canola | nucleus | 17.12 | 31.45 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078ECL1 | InterPro:AN1-like_Znf | EnsemblPlants:CDX98772 | ProteinID:CDX98772 |
| ProteinID:CDX98772.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00106854001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EE6630 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaA03g45570D
Coordinates
chrLK031906:-:1157793..1160874
Molecular Weight (calculated)
31962.1 Da
IEP (calculated)
7.706
GRAVY (calculated)
-0.453
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQNLMNICV SAGNLEAHYL RGMQEYFQNE NMAAGLELLE IAAQGSYDNA IYLYGIIMLC RGDPDIRKPQ LDSLGWRENK ARSDACWQSI KTSLHGVMVK
101: RGRNLTVPTG KMGSEQNDST SFTQSSEPKL CANGCGFFGS PSNMDLCSKC YRDICAEEAQ TAVAKAAVEK SFKPSPSPPP PTLFIAEPDV AKPEKEKAVA
201: TVLVVAEPSS ATGEATVPEQ NEPPSKPARP NRCLCCNKKV GILGFKCKCG STFCGEHRYP ERHDCSFDFK EAGRGEIAKA NPVIKADKLQ RF
101: RGRNLTVPTG KMGSEQNDST SFTQSSEPKL CANGCGFFGS PSNMDLCSKC YRDICAEEAQ TAVAKAAVEK SFKPSPSPPP PTLFIAEPDV AKPEKEKAVA
201: TVLVVAEPSS ATGEATVPEQ NEPPSKPARP NRCLCCNKKV GILGFKCKCG STFCGEHRYP ERHDCSFDFK EAGRGEIAKA NPVIKADKLQ RF
001: MGSEQNDSTS FTQSQASEPK LCVKGCGFFG SPSNMDLCSK CYRGICAEEA QTAVAKAAVE KSFKPSPPRS LFIAEPPAVV VEPKPEKAAV VVVSAEPSSS
101: AVPEANEPSR PARTNRCLCC NKKVGIMGFK CKCGSTFCGE HRYPETHDCS FDFKEVGRGE IAKANPVVKA DKIQRF
101: AVPEANEPSR PARTNRCLCC NKKVGIMGFK CKCGSTFCGE HRYPETHDCS FDFKEVGRGE IAKANPVVKA DKIQRF
Arabidopsis Description
SAP9Zinc finger A20 and AN1 domain-containing stress-associated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O49663]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.