CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04388	Canola	cytosol	95.65	95.65
Bra015203.1-P	Field mustard	plastid	63.77	40.74
Bra017832.1-P	Field mustard	nucleus	63.77	34.38
Bra028223.1-P	Field mustard	nucleus	63.77	34.11
Bra023869.1-P	Field mustard	plastid	56.52	26.71
Bra033124.1-P	Field mustard	nucleus, plastid	65.22	26.16
CDX86725	Canola	nucleus, plastid	59.42	25.15
AT4G12040.1	Thale cress	cytosol, nucleus, plastid	62.32	24.57
CDX94483	Canola	plastid	57.97	24.54
CDY03251	Canola	nucleus	44.93	21.99
CDY26566	Canola	nucleus	46.38	20.65
CDY16005	Canola	nucleus	46.38	20.13
CDY51557	Canola	nucleus	60.87	19.35
CDX95378	Canola	cytosol, nucleus, plastid	34.78	15.58
CDX67537	Canola	cytosol, nucleus, plastid	33.33	15.33
CDY13347	Canola	nucleus	33.33	14.94
CDX73602	Canola	cytosol, nucleus, plastid	34.78	14.91
CDY00788	Canola	cytosol, nucleus, plastid	33.33	14.84
CDY52666	Canola	nucleus	33.33	14.84
CDX84135	Canola	cytosol, nucleus, plastid	31.88	14.77
CDY50536	Canola	nucleus	33.33	14.74
CDX79670	Canola	nucleus	31.88	14.57
CDY08419	Canola	nucleus	33.33	14.47
CDY67538	Canola	nucleus	33.33	14.47
CDX73811	Canola	nucleus	33.33	14.47
CDY39818	Canola	nucleus	23.19	14.41
CDX75051	Canola	cytosol, nucleus, plastid	33.33	14.11
CDY66222	Canola	cytosol, nucleus, plastid	33.33	14.11
CDX90265	Canola	cytosol	26.09	13.85
CDY65025	Canola	cytosol	26.09	13.85
CDX84565	Canola	cytosol, nucleus, plastid	31.88	13.75
CDY60839	Canola	nucleus, plastid	31.88	13.41
CDY25219	Canola	cytosol, nucleus, plastid	31.88	13.1
CDY22831	Canola	cytosol, nucleus, plastid	31.88	13.1
CDX98772	Canola	cytosol, extracellular, nucleus	52.17	12.33
CDX92701	Canola	cytosol	23.19	11.85
CDY57287	Canola	cytosol	23.19	11.76
CDY49709	Canola	cytosol	21.74	11.45
CDX83273	Canola	cytosol, mitochondrion, nucleus	21.74	9.04
CDY31184	Canola	cytosol, mitochondrion, nucleus	21.74	8.88

Protein Annotations

EnsemblPlants:CDY00455

EnsemblPlantsGene:GSBRNA2T00110139001

ProteinID:CDY00455

ProteinID:CDY00455.1

UniParc:UPI0004EEC7AF

MapMan:35.2

Description

BnaA10g08180D

Coordinates

chrLK031919:-:161886..162543

Molecular Weight (calculated)

7873.5 Da

IEP (calculated)

7.007

GRAVY (calculated)

-0.301

Length

69 amino acids

Sequence
(BLAST)

1: MNSEQNNSTS FPPTEPELCD NRCASVVVTA EPCNKKAGVM GFKCKCVNYN QYILILLWCC LYKREEIPH

Best Arabidopsis Sequence Match ( AT4G12040.1 )
(BLAST)

001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI

Arabidopsis Description

SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.