Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94483 | Canola | plastid | 82.29 | 88.34 |
| Bra033124.1-P | Field mustard | nucleus, plastid | 86.29 | 87.79 |
| CDX86725 | Canola | nucleus, plastid | 81.71 | 87.73 |
| Bra029435.1-P | Field mustard | plastid | 87.43 | 87.43 |
| Bra015203.1-P | Field mustard | plastid | 49.71 | 80.56 |
| Bra023869.1-P | Field mustard | plastid | 57.14 | 68.49 |
| AT4G22820.2 | Thale cress | cytosol, nucleus, plastid | 68.57 | 68.18 |
| Bra017832.1-P | Field mustard | nucleus | 49.14 | 67.19 |
| Bra028223.1-P | Field mustard | nucleus | 49.14 | 66.67 |
| CDY04388 | Canola | cytosol | 25.71 | 65.22 |
| CDY00455 | Canola | cytosol | 24.57 | 62.32 |
| AT1G12440.2 | Thale cress | nucleus, plastid | 58.86 | 61.31 |
| CDY51557 | Canola | nucleus | 74.86 | 60.37 |
| VIT_02s0025g05080.t01 | Wine grape | cytosol | 32.57 | 57.0 |
| KRH04053 | Soybean | cytosol | 41.71 | 56.59 |
| KRH57322 | Soybean | cytosol, extracellular, nucleus | 39.43 | 56.1 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 54.29 | 55.23 |
| AT2G36320.1 | Thale cress | cytosol, nucleus, plastid | 43.43 | 47.2 |
| Solyc08g079700.1.1 | Tomato | cytosol | 43.43 | 46.06 |
| PGSC0003DMT400010084 | Potato | cytosol | 43.43 | 45.78 |
| AT3G52800.2 | Thale cress | nucleus | 41.71 | 42.94 |
| AT4G25380.1 | Thale cress | nucleus | 31.43 | 42.31 |
| AT2G27580.1 | Thale cress | cytosol, mitochondrion, nucleus | 38.29 | 41.1 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 27.43 | 38.4 |
| AT1G51200.2 | Thale cress | cytosol, nucleus, plastid | 34.86 | 35.26 |
| AT3G12630.1 | Thale cress | nucleus | 28.57 | 31.25 |
Protein Annotations
| PDB:1WG2 | MapMan:35.1 | Gene3D:4.10.1110.10 | EntrezGene:826812 | UniProt:A0A178V0G6 | ProteinID:AEE83089.1 |
| ProteinID:AEE83090.1 | EMBL:AF325093 | EMBL:AF361575 | InterPro:AN1-like_Znf | ArrayExpress:AT4G12040 | EnsemblPlantsGene:AT4G12040 |
| RefSeq:AT4G12040 | TAIR:AT4G12040 | RefSeq:AT4G12040-TAIR-G | EnsemblPlants:AT4G12040.1 | TAIR:AT4G12040.1 | EMBL:AY081720 |
| EMBL:AY088226 | Unigene:At.19630 | ProteinID:CAB40945.1 | ProteinID:CAB78247.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008270 | GO:GO:0009506 |
| GO:GO:0046872 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | RefSeq:NP_192941.1 | RefSeq:NP_849364.1 |
| ProteinID:OAO98562.1 | PFAM:PF01428 | PFAM:PF01754 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | UniProt:Q9SZ69 | SMART:SM00154 |
| SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI00000A7C92 | InterPro:Znf_A20 | InterPro:Znf_AN1 |
Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
Coordinates
chr4:+:7214577..7216715
Molecular Weight (calculated)
18991.6 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.506
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.