CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04053	Soybean	cytosol	90.24	86.05
Bra036643.1-P	Field mustard	nucleus	47.15	52.25
CDY39818	Canola	nucleus	47.15	52.25
VIT_02s0025g05080.t01	Wine grape	cytosol	41.46	51.0
CDY03251	Canola	nucleus	55.28	48.23
VIT_02s0025g05050.t01	Wine grape	nucleus	63.41	45.35
AT1G12440.2	Thale cress	nucleus, plastid	60.16	44.05
KRH67896	Soybean	cytosol, nucleus, plastid	52.03	40.0
AT4G12040.1	Thale cress	cytosol, nucleus, plastid	56.1	39.43
Solyc08g079700.1.1	Tomato	cytosol	52.85	39.39
KRH26620	Soybean	nucleus	50.41	39.24
KRG96184	Soybean	cytosol, nucleus, plastid	52.03	39.02
AT4G22820.2	Thale cress	cytosol, nucleus, plastid	54.47	38.07
PGSC0003DMT400010084	Potato	cytosol	51.22	37.95
KRH09258	Soybean	cytosol, extracellular, nucleus, plastid	43.09	37.32
KRH38756	Soybean	nucleus, plastid	45.53	36.13
KRH30848	Soybean	nucleus	50.41	36.05
KRH32726	Soybean	cytosol, nucleus, plastid	49.59	34.46
KRH66998	Soybean	nucleus	45.53	32.94
KRH29694	Soybean	cytosol	46.34	32.57
KRH10187	Soybean	nucleus	45.53	32.56
KRH24692	Soybean	cytosol	45.53	32.18
KRG95321	Soybean	cytosol	43.9	31.4
KRH23151	Soybean	nucleus	43.09	30.81
KRH30019	Soybean	cytosol	34.96	30.07
KRH01118	Soybean	cytosol	34.96	28.86
KRH13914	Soybean	cytosol, nucleus, plastid	35.77	27.33
KRH43492	Soybean	cytosol, nucleus, plastid	35.77	26.83
KRH20843	Soybean	plastid	29.27	26.28
KRH27497	Soybean	cytosol, nucleus, plastid	28.46	25.93

Protein Annotations

EntrezGene:100807386	MapMan:35.1	Gene3D:4.10.1110.10	EMBL:ACUP02002825	InterPro:AN1-like_Znf	EnsemblPlantsGene:GLYMA_05G054400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
UniProt:I1K0J5	InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	EnsemblPlants:KRH57322	ProteinID:KRH57322
ProteinID:KRH57322.1	PFAM:PF01428	PFAM:PF01754	PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634
PANTHER:PTHR10634:SF38	SMART:SM00154	SMART:SM00259	SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI000233A117
InterPro:Znf_A20	InterPro:Znf_AN1	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:4946732..4947103

Molecular Weight (calculated)

13252.8 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.559

Length

123 amino acids

Sequence
(BLAST)

001: MGSQQKPCAN NCGFFGTSEK RNLCSKCYKD LCLEEELAAM KSVLCSPAPP SPGTAGQSKP ANRCGTCNKK VGLTGFACKC GSTFCGVHRY PEKHECTYDF
101: KGEAREAISK ANPVVKGDKV DRF

Best Arabidopsis Sequence Match ( AT1G12440.1 )
(BLAST)

001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI

Arabidopsis Description

SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.