Factsheet for Bra036643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39818	Canola	nucleus	100.0	100.0
VIT_02s0025g05080.t01	Wine grape	cytosol	44.14	49.0
KRH57322	Soybean	cytosol, extracellular, nucleus	52.25	47.15
KRH04053	Soybean	cytosol	50.45	43.41
Bra015203.1-P	Field mustard	plastid	39.64	40.74
Bra026970.1-P	Field mustard	nucleus	54.95	39.35
Bra014276.1-P	Field mustard	cytosol	27.03	37.5
VIT_02s0025g05050.t01	Wine grape	nucleus	57.66	37.21
Bra033124.1-P	Field mustard	nucleus, plastid	55.86	36.05
Bra029435.1-P	Field mustard	plastid	54.95	34.86
Bra017832.1-P	Field mustard	nucleus	39.64	34.38
Bra028223.1-P	Field mustard	nucleus	39.64	34.11
Bra005282.1-P	Field mustard	nucleus	48.65	33.54
Bra019169.1-P	Field mustard	cytosol	37.84	32.06
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	46.85	31.9
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	45.95	31.88
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	49.55	31.25
Solyc08g079700.1.1	Tomato	cytosol	45.05	30.3
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	45.05	30.3
PGSC0003DMT400010084	Potato	cytosol	43.24	28.92
Bra010753.1-P	Field mustard	cytosol	33.33	28.46
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	46.85	27.81
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	38.74	25.6
Bra014278.1-P	Field mustard	nucleus	38.74	24.16
Bra001461.1-P	Field mustard	nucleus	32.43	22.64
Bra034748.1-P	Field mustard	nucleus	32.43	22.64
Bra038739.1-P	Field mustard	nucleus	31.53	22.44
Bra019354.1-P	Field mustard	cytosol, extracellular, nucleus	48.65	18.49
Bra023869.1-P	Field mustard	plastid	21.62	16.44

Protein Annotations

EnsemblPlants:Bra036643.1	EnsemblPlants:Bra036643.1-P	EnsemblPlantsGene:Bra036643	Gene3D:4.10.1110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0008270	GO:GO:0046872	InterPro:AN1-like_Znf	InterPro:IPR000058	InterPro:IPR035896	InterPro:Znf_AN1
PANTHER:PTHR10634	PANTHER:PTHR10634:SF38	PFAM:PF01428	PFscan:PS51039	SEG:seg	SMART:SM00154
SUPFAM:SSF118310	UniParc:UPI0002541A09	UniProt:M4F6D4	MapMan:35.1	:	:

Description

AT4G12040 (E=2e-026) | zinc finger (AN1-like) family protein

Coordinates

chrA09:-:5903988..5904323

Molecular Weight (calculated)

12183.3 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.674

Length

111 amino acids

Sequence
(BLAST)

001: MNLCSKCYHD LRVTQEASFE PETSLESALA SSSSSSESSG TAAQTSAKTR RCLSCNKKVG LMGFKCKCGS TFCGDHRYPE NHECEFDFRG QGRDAISKAN
101: PLVKGEKVKR F

Best Arabidopsis Sequence Match ( AT1G12440.1 )
(BLAST)

001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI

Arabidopsis Description

SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.