Factsheet for Bra023061.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84565	Canola	cytosol, nucleus, plastid	100.0	100.0
Bra005282.1-P	Field mustard	nucleus	83.75	83.23
AT2G36320.1	Thale cress	cytosol, nucleus, plastid	77.5	77.02
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	77.5	76.07
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	79.38	72.16
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	78.75	67.38
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	53.12	62.5
GSMUA_Achr6P17330_001	Banana	nucleus	55.0	61.11
VIT_08s0007g03530.t01	Wine grape	nucleus	59.38	59.01
KRH67896	Soybean	cytosol, nucleus, plastid	56.88	56.88
KRG96184	Soybean	cytosol, nucleus, plastid	57.5	56.1
GSMUA_Achr8P07710_001	Banana	cytosol, mitochondrion, nucleus	50.0	52.98
EES05173	Sorghum	cytosol, mitochondrion, nucleus	49.38	52.67
KRH30848	Soybean	nucleus	56.25	52.33
KRH32726	Soybean	cytosol, nucleus, plastid	57.5	51.98
Bra014276.1-P	Field mustard	cytosol	24.38	48.75
Bra026970.1-P	Field mustard	nucleus	46.88	48.39
Os02t0530300-01	Rice	cytosol, nucleus, plastid	46.25	48.05
KRH30019	Soybean	cytosol	41.25	46.15
Bra036643.1-P	Field mustard	nucleus	31.88	45.95
PGSC0003DMT400050131	Potato	cytosol, nucleus, plastid	50.62	44.26
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	45.62	44.24
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	45.62	43.45
Bra029435.1-P	Field mustard	plastid	46.88	42.86
Bra015203.1-P	Field mustard	plastid	28.12	41.67
Bra014278.1-P	Field mustard	nucleus	45.0	40.45
Bra033124.1-P	Field mustard	nucleus, plastid	43.12	40.12
Bra010753.1-P	Field mustard	cytosol	32.5	40.0
Bra019169.1-P	Field mustard	cytosol	31.25	38.17
Bra034748.1-P	Field mustard	nucleus	36.25	36.48
Bra038739.1-P	Field mustard	nucleus	34.38	35.26
Bra001461.1-P	Field mustard	nucleus	34.38	34.59
Bra017832.1-P	Field mustard	nucleus	27.5	34.38
Bra028223.1-P	Field mustard	nucleus	27.5	34.11
EES03677	Sorghum	peroxisome, plastid	36.88	33.71
Bra023869.1-P	Field mustard	plastid	25.0	27.4
Bra019354.1-P	Field mustard	cytosol, extracellular, nucleus	43.75	23.97
Os01t0765900-00	Rice	nucleus	43.12	19.44

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	EnsemblPlantsGene:Bra023061	EnsemblPlants:Bra023061.1	EnsemblPlants:Bra023061.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M4E2R0	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF43	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI000253FF0F	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

AT2G36320 (E=2e-060) | zinc finger (AN1-like) family protein

Coordinates

chrA03:+:8458878..8459360

Molecular Weight (calculated)

17411.9 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.287

Length

160 amino acids

Sequence
(BLAST)

001: MAEEHPCQTP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKNQQQASMK STVESSLSAA SPPSSPEIQS ISTSTIAPVV QIHAAEIQIE KQIQQQRPNR
101: CTVCRKRVGL TGFMCRCGTT FCGTHRYPEV HGCTFDFKSA GREEIAKANP LVVAAKLQKI

Best Arabidopsis Sequence Match ( AT2G36320.1 )
(BLAST)

001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I

Arabidopsis Description

SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.