Factsheet for Bra019645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66222	Canola	cytosol, nucleus, plastid	98.16	98.16
CDX95378	Canola	cytosol, nucleus, plastid	88.96	94.16
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	87.73	81.25
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	76.07	77.5
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	85.89	74.87
AT3G52800.2	Thale cress	nucleus	77.91	74.71
Bra005282.1-P	Field mustard	nucleus	73.01	73.91
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	52.15	62.5
VIT_08s0007g03530.t01	Wine grape	nucleus	58.28	59.01
GSMUA_Achr6P17330_001	Banana	nucleus	50.92	57.64
KRH67896	Soybean	cytosol, nucleus, plastid	54.6	55.62
KRG96184	Soybean	cytosol, nucleus, plastid	55.83	55.49
KRH30848	Soybean	nucleus	57.67	54.65
GSMUA_Achr8P07710_001	Banana	cytosol, mitochondrion, nucleus	50.31	54.3
KRH32726	Soybean	cytosol, nucleus, plastid	58.28	53.67
EES05173	Sorghum	cytosol, mitochondrion, nucleus	48.47	52.67
Bra014276.1-P	Field mustard	cytosol	24.54	50.0
PGSC0003DMT400050131	Potato	cytosol, nucleus, plastid	53.99	48.09
Os02t0530300-01	Rice	cytosol, nucleus, plastid	45.4	48.05
Bra036643.1-P	Field mustard	nucleus	31.9	46.85
KRH30019	Soybean	cytosol	40.49	46.15
Bra026970.1-P	Field mustard	nucleus	43.56	45.81
Bra018900.1-P	Field mustard	cytosol, nucleus, plastid	44.79	43.45
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.56	43.03
Bra015203.1-P	Field mustard	plastid	27.61	41.67
Bra014278.1-P	Field mustard	nucleus	45.4	41.57
Bra029435.1-P	Field mustard	plastid	43.56	40.57
Bra010753.1-P	Field mustard	cytosol	31.9	40.0
Bra019169.1-P	Field mustard	cytosol	31.29	38.93
Bra033124.1-P	Field mustard	nucleus, plastid	40.49	38.37
Bra034748.1-P	Field mustard	nucleus	34.97	35.85
Bra038739.1-P	Field mustard	nucleus	33.74	35.26
Bra001461.1-P	Field mustard	nucleus	34.36	35.22
Bra017832.1-P	Field mustard	nucleus	27.61	35.16
Bra028223.1-P	Field mustard	nucleus	27.61	34.88
EES03677	Sorghum	peroxisome, plastid	34.97	32.57
Bra023869.1-P	Field mustard	plastid	21.47	23.97
Bra019354.1-P	Field mustard	cytosol, extracellular, nucleus	42.33	23.63
Os01t0765900-00	Rice	nucleus	41.72	19.15

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	EnsemblPlantsGene:Bra019645	EnsemblPlants:Bra019645.1	EnsemblPlants:Bra019645.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M4DT02	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF43	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI000253E737	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

AT3G52800 (E=8e-063) | zinc finger (AN1-like) family protein

Coordinates

chrA06:+:5239092..5239583

Molecular Weight (calculated)

17627.2 Da

IEP (calculated)

8.694

GRAVY (calculated)

-0.394

Length

163 amino acids

Sequence
(BLAST)

001: MAEEHRCQTP EGHRLCANNC GFLGSSATMN LCSNCYGDLC LKQQQQGSSS LSAVSPPSPV ITSISTPMIQ PLVQNPSAEL EVPAKNVPVT VTATEQPQKR
101: PNRCTTCRKR VGLTGFKCRC GTTFCGAHRY PEVHGCTFDF KSAGREEIAK ANPLVKTAKL QKI

Best Arabidopsis Sequence Match ( AT3G52800.1 )
(BLAST)

001: MAEEHRCQTP ESNRLCVNNC GFLGSSATMN LCSNCYGDLC LKQQQQSSSI KSTVESSLSV SPPSSSSSEI SSPIIPPLLK NPSVKLEVPE KKAVISLPTT
101: EQNQQQRPNR CTTCRKRVGL TGFKCRCGTM FCGVHRYPEI HGCSYDFKSA GREEIAKANP LVKAAKLQKI

Arabidopsis Description

SAP6A20/AN1-like zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VIF4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.