Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019645.1-P | Field mustard | cytosol, nucleus, plastid | 94.16 | 88.96 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 93.51 | 88.34 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 81.82 | 84.0 |
| CDY13347 | Canola | nucleus | 82.47 | 82.47 |
| CDX79670 | Canola | nucleus | 77.27 | 78.81 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 79.87 | 76.4 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 77.92 | 75.0 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 72.08 | 74.5 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 74.68 | 70.55 |
| AT3G52800.2 | Thale cress | nucleus | 77.27 | 70.0 |
| GSMUA_Achr3P22730_001 | Banana | cytosol, mitochondrion, nucleus | 54.55 | 61.76 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 61.04 | 58.39 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 53.9 | 57.64 |
| KRH67896 | Soybean | cytosol, nucleus, plastid | 56.49 | 54.38 |
| KRH30848 | Soybean | nucleus | 60.39 | 54.07 |
| KRG96184 | Soybean | cytosol, nucleus, plastid | 56.49 | 53.05 |
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 51.3 | 52.32 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 50.65 | 52.0 |
| KRH32726 | Soybean | cytosol, nucleus, plastid | 59.74 | 51.98 |
| Os02t0530300-01 | Rice | cytosol, nucleus, plastid | 47.4 | 47.4 |
| CDY39818 | Canola | nucleus | 33.77 | 46.85 |
| CDY26566 | Canola | nucleus | 46.75 | 46.45 |
| PGSC0003DMT400050131 | Potato | cytosol, nucleus, plastid | 55.19 | 46.45 |
| KRH30019 | Soybean | cytosol | 42.21 | 45.45 |
| CDY16005 | Canola | nucleus | 46.75 | 45.28 |
| CDY03251 | Canola | nucleus | 40.91 | 44.68 |
| CDY60839 | Canola | nucleus, plastid | 45.45 | 42.68 |
| CDX94483 | Canola | plastid | 44.81 | 42.33 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 45.45 | 42.17 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 46.1 | 42.01 |
| CDX86725 | Canola | nucleus, plastid | 44.16 | 41.72 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 45.45 | 41.67 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 45.45 | 41.67 |
| CDX90265 | Canola | cytosol | 33.77 | 40.0 |
| CDY65025 | Canola | cytosol | 33.77 | 40.0 |
| CDY49709 | Canola | cytosol | 33.77 | 39.69 |
| CDY57287 | Canola | cytosol | 34.42 | 38.97 |
| CDX92701 | Canola | cytosol | 33.12 | 37.78 |
| CDY08419 | Canola | nucleus | 38.31 | 37.11 |
| CDY52666 | Canola | nucleus | 37.01 | 36.77 |
| CDY50536 | Canola | nucleus | 37.01 | 36.54 |
| CDY67538 | Canola | nucleus | 37.66 | 36.48 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 35.71 | 35.48 |
| CDX73811 | Canola | nucleus | 36.36 | 35.22 |
| CDY04388 | Canola | cytosol | 15.58 | 34.78 |
| CDY00455 | Canola | cytosol | 15.58 | 34.78 |
| EES03677 | Sorghum | peroxisome, plastid | 37.01 | 32.57 |
| CDY51557 | Canola | nucleus | 42.86 | 30.41 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 43.51 | 22.95 |
| Os01t0765900-00 | Rice | nucleus | 44.81 | 19.44 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078E7M2 | InterPro:AN1-like_Znf | EnsemblPlants:CDX95378 | ProteinID:CDX95378 |
| ProteinID:CDX95378.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00101088001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF43 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EE799C | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaC04g27800D
Coordinates
chrLK031888:+:815198..816410
Molecular Weight (calculated)
16683.1 Da
IEP (calculated)
8.831
GRAVY (calculated)
-0.380
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEHRCQTP EGHRLCANNC GFLGNSATMN LCSNCYGDLC LKQQQQGSSS LSAVSPPSPV ITSISTPLIH PLVTAKDVPV TITATEQQQK RPNRCTTCRK
101: RVGLTGFKCR CGTTFCGAHR YPEVHGCTFD FKSAGREEIA KANPLVKAGK LQKI
101: RVGLTGFKCR CGTTFCGAHR YPEVHGCTFD FKSAGREEIA KANPLVKAGK LQKI
001: MAEEHRCQTP ESNRLCVNNC GFLGSSATMN LCSNCYGDLC LKQQQQSSSI KSTVESSLSV SPPSSSSSEI SSPIIPPLLK NPSVKLEVPE KKAVISLPTT
101: EQNQQQRPNR CTTCRKRVGL TGFKCRCGTM FCGVHRYPEI HGCSYDFKSA GREEIAKANP LVKAAKLQKI
101: EQNQQQRPNR CTTCRKRVGL TGFKCRCGTM FCGVHRYPEI HGCSYDFKSA GREEIAKANP LVKAAKLQKI
Arabidopsis Description
SAP6A20/AN1-like zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VIF4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.