CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30848	Soybean	nucleus	85.88	88.37
KRH67896	Soybean	cytosol, nucleus, plastid	65.54	72.5
KRG96184	Soybean	cytosol, nucleus, plastid	63.84	68.9
CDX67537	Canola	cytosol, nucleus, plastid	54.8	64.67
KRH30019	Soybean	cytosol	51.41	63.64
CDY13347	Canola	nucleus	55.37	63.64
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	48.59	63.24
VIT_08s0007g03530.t01	Wine grape	nucleus	56.5	62.11
CDX79670	Canola	nucleus	52.54	61.59
CDX95378	Canola	cytosol, nucleus, plastid	51.98	59.74
CDY66222	Canola	cytosol, nucleus, plastid	54.8	59.51
CDX73602	Canola	cytosol, nucleus, plastid	53.11	58.39
GSMUA_Achr6P17330_001	Banana	nucleus	47.46	58.33
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	53.67	58.28
GSMUA_Achr8P07710_001	Banana	cytosol, mitochondrion, nucleus	49.72	58.28
CDX84565	Canola	cytosol, nucleus, plastid	51.98	57.5
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	51.98	57.5
AT2G36320.1	Thale cress	cytosol, nucleus, plastid	51.41	56.52
Bra005282.1-P	Field mustard	nucleus	51.41	56.52
AT3G52800.2	Thale cress	nucleus	54.24	56.47
CDX75051	Canola	cytosol, nucleus, plastid	51.98	56.44
CDX84135	Canola	cytosol, nucleus, plastid	47.46	56.38
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	55.37	55.68
KRH26620	Soybean	nucleus	48.02	53.8
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	56.5	53.48
EES05173	Sorghum	cytosol, mitochondrion, nucleus	45.2	53.33
Os02t0530300-01	Rice	cytosol, nucleus, plastid	45.76	52.6
KRH04053	Soybean	cytosol	37.85	51.94
KRH57322	Soybean	cytosol, extracellular, nucleus	34.46	49.59
PGSC0003DMT400050131	Potato	cytosol, nucleus, plastid	47.46	45.9
KRH10187	Soybean	nucleus	41.81	43.02
KRH29694	Soybean	cytosol	41.81	42.29
KRH24692	Soybean	cytosol	41.24	41.95
KRH23151	Soybean	nucleus	40.68	41.86
KRH66998	Soybean	nucleus	40.11	41.76
KRG95321	Soybean	cytosol	40.11	41.28
KRH01118	Soybean	cytosol	34.46	40.94
KRH13914	Soybean	cytosol, nucleus, plastid	35.03	38.51
KRH43492	Soybean	cytosol, nucleus, plastid	35.03	37.8
KRH09258	Soybean	cytosol, extracellular, nucleus, plastid	28.81	35.92
KRH20843	Soybean	plastid	27.68	35.77
KRH27497	Soybean	cytosol, nucleus, plastid	27.12	35.56
KRH38756	Soybean	nucleus, plastid	31.07	35.48
EES03677	Sorghum	peroxisome, plastid	35.03	35.43
Os01t0765900-00	Rice	nucleus	38.98	19.44

Protein Annotations

EntrezGene:100813749	MapMan:35.1	Gene3D:4.10.1110.10	EMBL:ACUP02006154	InterPro:AN1-like_Znf	EnsemblPlantsGene:GLYMA_10G070900
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
UniProt:I1L9B9	InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	EnsemblPlants:KRH32726	ProteinID:KRH32726
ProteinID:KRH32726.1	PFAM:PF01428	PFAM:PF01754	PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634
PANTHER:PTHR10634:SF43	SMART:SM00154	SMART:SM00259	SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI0001CACA5B
InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:7133090..7134497

Molecular Weight (calculated)

18828.3 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.236

Length

177 amino acids

Sequence
(BLAST)

001: MAEEHRCEPP EGHRLCVNNC GFFGSTATMN LCSKCYSAIR LKEQEEASTK STIETALSSA SSAKPSSSTS PPPSAVDVLM ESPPPSAAEV EVAVTVTVAV
101: ASSSISINSG SVAQPNRCAT CRKRVGLTGF KCRCGVTFCG AHRYPEEHAC GFDFKTVGRE EIARANPVIK AEKLRRI

Best Arabidopsis Sequence Match ( AT2G36320.1 )
(BLAST)

001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I

Arabidopsis Description

SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.