Factsheet for GSMUA_Achr8P07710_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P06970_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27580.1	GSMUA_Achr5P06970_001	AT3G61790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22730_001	Banana	cytosol, mitochondrion, nucleus	76.16	84.56
GSMUA_Achr6P17330_001	Banana	nucleus	61.59	64.58
EES05173	Sorghum	cytosol, mitochondrion, nucleus	58.28	58.67
Os02t0530300-01	Rice	cytosol, nucleus, plastid	58.94	57.79
KRH67896	Soybean	cytosol, nucleus, plastid	60.26	56.88
VIT_08s0007g03530.t01	Wine grape	nucleus	60.26	56.52
KRG96184	Soybean	cytosol, nucleus, plastid	60.93	56.1
CDX67537	Canola	cytosol, nucleus, plastid	55.63	56.0
CDX79670	Canola	nucleus	53.64	53.64
CDY13347	Canola	nucleus	54.3	53.25
KRH26620	Soybean	nucleus	54.97	52.53
CDX95378	Canola	cytosol, nucleus, plastid	52.32	51.3
CDX84135	Canola	cytosol, nucleus, plastid	50.33	51.01
CDY66222	Canola	cytosol, nucleus, plastid	54.97	50.92
AT2G36320.1	Thale cress	cytosol, nucleus, plastid	53.64	50.31
CDX73602	Canola	cytosol, nucleus, plastid	53.64	50.31
Bra019645.1-P	Field mustard	cytosol, nucleus, plastid	54.3	50.31
CDX84565	Canola	cytosol, nucleus, plastid	52.98	50.0
Bra023061.1-P	Field mustard	cytosol, nucleus, plastid	52.98	50.0
KRH32726	Soybean	cytosol, nucleus, plastid	58.28	49.72
Bra005282.1-P	Field mustard	nucleus	52.98	49.69
CDX75051	Canola	cytosol, nucleus, plastid	52.98	49.08
KRH30848	Soybean	nucleus	55.63	48.84
GSMUA_AchrUn_...	Banana	cytosol, extracellular, nucleus, plastid	31.79	48.48
Bra006949.1-P	Field mustard	cytosol, nucleus, plastid	56.29	48.3
Solyc10g083460.1.1	Tomato	nucleus, peroxisome, plastid	50.33	47.8
GSMUA_Achr9P27570_001	Banana	cytosol, mitochondrion, nucleus	34.44	46.85
GSMUA_Achr9P07600_001	Banana	nucleus	43.71	46.81
PGSC0003DMT400072393	Potato	cytosol, nucleus, peroxisome	49.01	46.54
GSMUA_Achr1P19600_001	Banana	cytosol	43.71	46.48
AT3G52800.2	Thale cress	nucleus	52.32	46.47
GSMUA_Achr9P17970_001	Banana	cytosol, mitochondrion, nucleus	43.05	46.1
GSMUA_Achr7P06320_001	Banana	cytosol	43.71	45.21
Solyc09g009590.1.1	Tomato	cytosol	44.37	44.37
PGSC0003DMT400006957	Potato	cytosol	43.71	44.0
Bra028533.1-P	Field mustard	cytosol, nucleus, plastid	54.3	43.85
GSMUA_Achr9P22330_001	Banana	cytosol	46.36	42.68
PGSC0003DMT400050131	Potato	cytosol, nucleus, plastid	51.66	42.62
GSMUA_Achr7P01460_001	Banana	cytosol, nucleus, plastid	47.68	42.6
AT2G27580.1	Thale cress	cytosol, mitochondrion, nucleus	45.03	41.72
GSMUA_Achr2P12750_001	Banana	nucleus, peroxisome, plastid	45.7	40.83
GSMUA_Achr9P19860_001	Banana	nucleus	41.72	40.65
GSMUA_Achr3P11070_001	Banana	nucleus	41.72	40.65
KRH30019	Soybean	cytosol	38.41	40.56
KRH01118	Soybean	cytosol	39.74	40.27
GSMUA_Achr3P11830_001	Banana	plastid	27.15	40.2
Bra000505.1-P	Field mustard	cytosol, mitochondrion, nucleus	43.71	40.0
CDX83273	Canola	cytosol, mitochondrion, nucleus	43.71	39.76
CDY31184	Canola	cytosol, mitochondrion, nucleus	43.71	39.05
GSMUA_Achr5P25610_001	Banana	plastid	31.79	33.1
EES03677	Sorghum	peroxisome, plastid	37.75	32.57
GSMUA_Achr11P...	Banana	nucleus	31.79	30.77
GSMUA_Achr3P19340_001	Banana	nucleus	29.14	30.14
GSMUA_Achr9P07860_001	Banana	nucleus	30.46	30.07
Os01t0765900-00	Rice	nucleus	43.05	18.31

Protein Annotations

MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0008270	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr8G07710_001	EnsemblPlants:GSMUA_Achr8P07710_001	EnsemblPlants:GSMUA_Achr8T07710_001
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	UniProt:M0TNH4	PFAM:PF01428	PFAM:PF01754
PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF38	SMART:SM00154	SMART:SM00259
SUPFAM:SSF118310	SUPFAM:SSF57716	UniParc:UPI0002958763	InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg

Description

Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07710_001]

Coordinates

chr8:+:5154194..5155163

Molecular Weight (calculated)

16367.4 Da

IEP (calculated)

9.463

GRAVY (calculated)

-0.585

Length

151 amino acids

Sequence
(BLAST)

001: MAEKQRCQEG HRPCANNCSF FGSPATLNLC SKCYRDFRLK EEQAASAKLA VEISLSPPPS SAATVSSSTA PSSPSEKPSE AAAEPAPRPT RCKSCRKRVG
101: LTGFRCRCGS TYCGQHRYPE RHACAFDYKA AGREAIALAN PVVKADKLRR I

Best Arabidopsis Sequence Match ( AT2G36320.1 )
(BLAST)

001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I

Arabidopsis Description

SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.