Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84565 | Canola | cytosol, nucleus, plastid | 96.03 | 90.62 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 84.11 | 85.23 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 82.12 | 82.67 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 88.08 | 81.6 |
| CDY13347 | Canola | nucleus | 82.12 | 80.52 |
| AT2G36320.1 | Thale cress | cytosol, nucleus, plastid | 83.44 | 78.26 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 78.81 | 77.27 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 80.13 | 74.23 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 73.51 | 68.94 |
| GSMUA_Achr3P22730_001 | Banana | cytosol, mitochondrion, nucleus | 56.95 | 63.24 |
| GSMUA_Achr6P17330_001 | Banana | nucleus | 57.62 | 60.42 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 62.91 | 59.01 |
| KRH67896 | Soybean | cytosol, nucleus, plastid | 60.26 | 56.88 |
| KRG96184 | Soybean | cytosol, nucleus, plastid | 60.93 | 56.1 |
| GSMUA_Achr8P07710_001 | Banana | cytosol, mitochondrion, nucleus | 53.64 | 53.64 |
| KRH30848 | Soybean | nucleus | 60.26 | 52.91 |
| KRH32726 | Soybean | cytosol, nucleus, plastid | 61.59 | 52.54 |
| EES05173 | Sorghum | cytosol, mitochondrion, nucleus | 51.66 | 52.0 |
| CDY26566 | Canola | nucleus | 50.33 | 49.03 |
| Os02t0530300-01 | Rice | cytosol, nucleus, plastid | 49.01 | 48.05 |
| CDY16005 | Canola | nucleus | 50.33 | 47.8 |
| KRH30019 | Soybean | cytosol | 43.71 | 46.15 |
| CDY03251 | Canola | nucleus | 43.05 | 46.1 |
| CDY39818 | Canola | nucleus | 33.77 | 45.95 |
| CDX94483 | Canola | plastid | 48.34 | 44.79 |
| PGSC0003DMT400050131 | Potato | cytosol, nucleus, plastid | 53.64 | 44.26 |
| CDX86725 | Canola | nucleus, plastid | 47.68 | 44.17 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 47.68 | 43.37 |
| CDY60839 | Canola | nucleus, plastid | 45.7 | 42.07 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 47.02 | 42.01 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 46.36 | 41.67 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 46.36 | 41.67 |
| CDY57287 | Canola | cytosol | 35.1 | 38.97 |
| CDY65025 | Canola | cytosol | 33.11 | 38.46 |
| CDX90265 | Canola | cytosol | 33.11 | 38.46 |
| CDY49709 | Canola | cytosol | 33.11 | 38.17 |
| CDY08419 | Canola | nucleus | 38.41 | 36.48 |
| CDX92701 | Canola | cytosol | 32.45 | 36.3 |
| CDY67538 | Canola | nucleus | 37.75 | 35.85 |
| CDY52666 | Canola | nucleus | 36.42 | 35.48 |
| CDY50536 | Canola | nucleus | 36.42 | 35.26 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 35.76 | 34.84 |
| CDX73811 | Canola | nucleus | 36.42 | 34.59 |
| EES03677 | Sorghum | peroxisome, plastid | 39.07 | 33.71 |
| CDY04388 | Canola | cytosol | 14.57 | 31.88 |
| CDY00455 | Canola | cytosol | 14.57 | 31.88 |
| CDY51557 | Canola | nucleus | 44.37 | 30.88 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 47.02 | 24.32 |
| Os01t0765900-00 | Rice | nucleus | 45.7 | 19.44 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078CS79 | InterPro:AN1-like_Znf | EnsemblPlants:CDX79670 | ProteinID:CDX79670 |
| ProteinID:CDX79670.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00132465001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF43 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EE6246 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaC03g20060D
Coordinates
chrLK031818:+:1483251..1483903
Molecular Weight (calculated)
16416.7 Da
IEP (calculated)
8.436
GRAVY (calculated)
-0.401
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEHPCQTP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKNQQQASMK STVESSLSAA SPPPSSEIQS ISTSTIAPKQ IQQQPPQRPN RCTVCRKRVG
101: LTGFMCRCGT TFCGTHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: LTGFMCRCGT TFCGTHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.