Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39818 | Canola | nucleus | 74.47 | 94.59 |
| KRH57322 | Soybean | cytosol, extracellular, nucleus | 48.23 | 55.28 |
| KRH04053 | Soybean | cytosol | 49.65 | 54.26 |
| CDY26566 | Canola | nucleus | 58.87 | 53.55 |
| CDY16005 | Canola | nucleus | 58.87 | 52.2 |
| CDX86725 | Canola | nucleus, plastid | 57.45 | 49.69 |
| CDX94483 | Canola | plastid | 57.45 | 49.69 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 59.57 | 48.84 |
| CDY04388 | Canola | cytosol | 23.4 | 47.83 |
| VIT_02s0025g05080.t01 | Wine grape | cytosol | 33.33 | 47.0 |
| CDX84135 | Canola | cytosol, nucleus, plastid | 48.23 | 45.64 |
| CDY00455 | Canola | cytosol | 21.99 | 44.93 |
| CDX79670 | Canola | nucleus | 46.1 | 43.05 |
| CDX67537 | Canola | cytosol, nucleus, plastid | 44.68 | 42.0 |
| CDX75051 | Canola | cytosol, nucleus, plastid | 48.23 | 41.72 |
| CDX95378 | Canola | cytosol, nucleus, plastid | 44.68 | 40.91 |
| CDY13347 | Canola | nucleus | 44.68 | 40.91 |
| CDX84565 | Canola | cytosol, nucleus, plastid | 46.1 | 40.62 |
| Solyc08g079700.1.1 | Tomato | cytosol | 46.81 | 40.0 |
| CDX73602 | Canola | cytosol, nucleus, plastid | 44.68 | 39.13 |
| CDY49709 | Canola | cytosol | 36.17 | 38.93 |
| CDY66222 | Canola | cytosol, nucleus, plastid | 44.68 | 38.65 |
| PGSC0003DMT400010084 | Potato | cytosol | 44.68 | 37.95 |
| CDY57287 | Canola | cytosol | 36.17 | 37.5 |
| CDY31184 | Canola | cytosol, mitochondrion, nucleus | 44.68 | 37.28 |
| CDY51557 | Canola | nucleus | 56.74 | 36.87 |
| CDX90265 | Canola | cytosol | 33.33 | 36.15 |
| CDY65025 | Canola | cytosol | 33.33 | 36.15 |
| CDX83273 | Canola | cytosol, mitochondrion, nucleus | 42.55 | 36.14 |
| CDX92701 | Canola | cytosol | 33.33 | 34.81 |
| CDY25219 | Canola | cytosol, nucleus, plastid | 39.72 | 33.33 |
| CDY22831 | Canola | cytosol, nucleus, plastid | 39.72 | 33.33 |
| CDY60839 | Canola | nucleus, plastid | 38.3 | 32.93 |
| CDY08419 | Canola | nucleus | 31.91 | 28.3 |
| CDY52666 | Canola | nucleus | 30.5 | 27.74 |
| CDY67538 | Canola | nucleus | 31.21 | 27.67 |
| CDY50536 | Canola | nucleus | 30.5 | 27.56 |
| CDX73811 | Canola | nucleus | 30.5 | 27.04 |
| CDX98772 | Canola | cytosol, extracellular, nucleus | 55.32 | 26.71 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 29.08 | 26.45 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | GO:A0A078EPT9 | InterPro:AN1-like_Znf | EnsemblPlants:CDY03251 | ProteinID:CDY03251 |
| ProteinID:CDY03251.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00115785001 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0004EDBDCC | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
BnaC09g10970D
Coordinates
chrLK031942:+:44692..45117
Molecular Weight (calculated)
15391.0 Da
IEP (calculated)
7.881
GRAVY (calculated)
-0.650
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEQNESTS FSQSEPKLCL NGCGFFGTAA SMNLCSKCYH DLRVTQEASF EPETSLESAL ASSSSSKSSE TAPQTSAKTR RCLSCNKKVG LMGFKCKCGS
101: TFCGDHRYPE NHECEFDFRG QGRDAITKAN PLVNGEKVKR F
101: TFCGDHRYPE NHECEFDFRG QGRDAITKAN PLVNGEKVKR F
001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI
Arabidopsis Description
SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.