Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010084 | Potato | cytosol | 91.52 | 90.96 |
| KRH57322 | Soybean | cytosol, extracellular, nucleus | 39.39 | 52.85 |
| KRH04053 | Soybean | cytosol | 41.21 | 52.71 |
| VIT_02s0025g05080.t01 | Wine grape | cytosol | 28.48 | 47.0 |
| CDY03251 | Canola | nucleus | 40.0 | 46.81 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 48.48 | 46.51 |
| AT4G22820.2 | Thale cress | cytosol, nucleus, plastid | 48.48 | 45.45 |
| Bra036643.1-P | Field mustard | nucleus | 30.3 | 45.05 |
| CDY39818 | Canola | nucleus | 30.3 | 45.05 |
| AT1G12440.2 | Thale cress | nucleus, plastid | 45.45 | 44.64 |
| AT4G12040.1 | Thale cress | cytosol, nucleus, plastid | 46.06 | 43.43 |
| Solyc10g083460.1.1 | Tomato | nucleus, peroxisome, plastid | 41.21 | 42.77 |
| Solyc01g014180.2.1 | Tomato | nucleus | 43.03 | 41.52 |
| Solyc11g061770.1.1 | Tomato | nucleus | 40.61 | 39.41 |
| Solyc09g009590.1.1 | Tomato | cytosol | 35.76 | 39.07 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 30.91 | 38.64 |
| Solyc10g079080.1.1 | Tomato | cytosol, nucleus, peroxisome | 38.79 | 37.21 |
| Solyc01g086970.2.1 | Tomato | cytosol, nucleus, plastid | 28.48 | 34.06 |
| Solyc01g086960.2.1 | Tomato | nucleus | 33.33 | 29.26 |
| Solyc12g100060.1.1 | Tomato | cytosol, nucleus, plastid | 27.27 | 28.12 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 |
| UniProt:K4CNX0 | PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 |
| PANTHER:PTHR10634:SF38 | SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | EnsemblPlantsGene:Solyc08g079700.1 |
| EnsemblPlants:Solyc08g079700.1.1 | UniParc:UPI000276B302 | InterPro:Znf_A20 | InterPro:Znf_AN1 | : | : |
Description
No Description!
Coordinates
chr8:+:63177880..63178377
Molecular Weight (calculated)
17928.5 Da
IEP (calculated)
8.558
GRAVY (calculated)
-0.358
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEGNKFND GTSFPPADPI LCSNGCGFFG TAATNGLCSK CYRDFKMKED HAAMAKVAME KLVISRPQIE SIGKVDFCSS TTSTAAERPV VEAATAEIGG
101: SQPNRCLSCR KKVGFVGFKC RCGSTFCGTH RYPEKHDCTF DFKIKGKEEI CKANPVVKAD KIQRF
101: SQPNRCLSCR KKVGFVGFKC RCGSTFCGTH RYPEKHDCTF DFKIKGKEEI CKANPVVKAD KIQRF
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Arabidopsis Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.