Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g01260.t01 | Wine grape | nucleus | 33.0 | 49.25 |
| VIT_18s0001g00430.t01 | Wine grape | nucleus | 33.0 | 49.25 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 83.0 | 48.26 |
| CDY39818 | Canola | nucleus | 49.0 | 44.14 |
| Bra036643.1-P | Field mustard | nucleus | 49.0 | 44.14 |
| KRH57322 | Soybean | cytosol, extracellular, nucleus | 51.0 | 41.46 |
| KRH04053 | Soybean | cytosol | 51.0 | 39.53 |
| CDY03251 | Canola | nucleus | 47.0 | 33.33 |
| AT4G12040.1 | Thale cress | cytosol, nucleus, plastid | 57.0 | 32.57 |
| AT1G12440.2 | Thale cress | nucleus, plastid | 53.0 | 31.55 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 49.0 | 30.43 |
| PGSC0003DMT400010084 | Potato | cytosol | 48.0 | 28.92 |
| Solyc08g079700.1.1 | Tomato | cytosol | 47.0 | 28.48 |
| AT4G22820.2 | Thale cress | cytosol, nucleus, plastid | 50.0 | 28.41 |
| VIT_06s0004g01820.t01 | Wine grape | nucleus | 46.0 | 26.74 |
| VIT_08s0007g07950.t01 | Wine grape | cytosol, nucleus, plastid | 45.0 | 26.16 |
| VIT_06s0004g01790.t01 | Wine grape | nucleus | 36.0 | 25.35 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 39.0 | 25.32 |
| VIT_13s0064g01210.t01 | Wine grape | nucleus | 42.0 | 24.42 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 37.0 | 24.34 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 39.0 | 22.67 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 38.0 | 15.9 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | ProteinID:CBI34811 | ProteinID:CBI34811.3 | UniProt:D7TWD6 |
| EMBL:FN596251 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000058 |
| InterPro:IPR035896 | PFAM:PF01428 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | SMART:SM00154 |
| SUPFAM:SSF118310 | UniParc:UPI0001BE440B | ArrayExpress:VIT_02s0025g05080 | EnsemblPlantsGene:VIT_02s0025g05080 | EnsemblPlants:VIT_02s0025g05080.t01 | InterPro:Znf_AN1 |
Description
No Description!
Coordinates
chr2:+:4535846..4538891
Molecular Weight (calculated)
10919.1 Da
IEP (calculated)
8.774
GRAVY (calculated)
-0.498
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MQSPYGHEIQ LSLETKSAFC GLSWSCVGGG DKSEPKVPNR CMSCNKKVGL TGFRCKCGST FCGAHRYPEK HECTFDFKAS GRDAIAKANP VVKADKLDRL
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Arabidopsis Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.