Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g01260.t01 | Wine grape | nucleus | 40.85 | 86.57 |
| VIT_18s0001g00430.t01 | Wine grape | nucleus | 40.85 | 86.57 |
| PGSC0003DMT400061226 | Potato | cytosol, nucleus, plastid | 54.93 | 49.06 |
| Solyc12g100060.1.1 | Tomato | cytosol, nucleus, plastid | 54.93 | 48.75 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 50.7 | 41.86 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 42.96 | 39.35 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 42.25 | 38.71 |
| VIT_02s0025g05080.t01 | Wine grape | cytosol | 25.35 | 36.0 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 38.73 | 35.71 |
| Zm00001d020926_P001 | Maize | cytosol, nucleus, plastid | 40.85 | 35.58 |
| OQU89687 | Sorghum | nucleus | 42.25 | 34.88 |
| TraesCS5B01G262900.1 | Wheat | nucleus | 38.73 | 33.95 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 38.03 | 33.54 |
| Zm00001d006016_P001 | Maize | nucleus | 38.03 | 33.54 |
| Os09t0486500-02 | Rice | nucleus | 38.73 | 33.54 |
| Zm00001d031423_P001 | Maize | cytosol, nucleus, plastid | 41.55 | 33.52 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 41.55 | 33.52 |
| TraesCS5D01G271100.1 | Wheat | nucleus | 38.73 | 33.33 |
| Os08t0504700-01 | Rice | cytosol, nucleus, plastid | 39.44 | 32.94 |
| TraesCS7B01G146400.1 | Wheat | nucleus | 38.73 | 32.16 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 38.73 | 32.16 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 38.73 | 31.98 |
| VIT_06s0004g01820.t01 | Wine grape | nucleus | 33.8 | 27.91 |
| VIT_08s0007g03530.t01 | Wine grape | nucleus | 30.99 | 27.33 |
| VIT_13s0064g01210.t01 | Wine grape | nucleus | 32.39 | 26.74 |
| VIT_08s0007g07950.t01 | Wine grape | cytosol, nucleus, plastid | 31.69 | 26.16 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 27.46 | 25.32 |
| VIT_02s0025g05050.t01 | Wine grape | nucleus | 30.28 | 25.0 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 24.65 | 23.03 |
| HORVU5Hr1G072920.1 | Barley | plastid | 38.73 | 22.09 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 26.76 | 15.9 |
Protein Annotations
| EntrezGene:100251836 | wikigene:100251836 | MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | ProteinID:CBI16411 |
| ProteinID:CBI16411.3 | ncoils:Coil | UniProt:D7SL83 | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | InterPro:IPR000058 | InterPro:IPR035896 | EntrezGene:LOC100251836 | wikigene:LOC100251836 |
| PFAM:PF01428 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF22 | SMART:SM00154 | SUPFAM:SSF118310 |
| TIGR:TC53538 | UniParc:UPI0001BE1194 | ArrayExpress:VIT_06s0004g01790 | EnsemblPlantsGene:VIT_06s0004g01790 | EnsemblPlants:VIT_06s0004g01790.t01 | unigene:Vvi.279 |
| RefSeq:XP_002285543 | RefSeq:XP_002285543.1 | InterPro:Znf_AN1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6:-:2218396..2219421
Molecular Weight (calculated)
16151.4 Da
IEP (calculated)
9.485
GRAVY (calculated)
-0.849
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRDLKVPQI STLKSRMAQK RENEQATETE LKVPETLTLC VQTCGFSASD KPRSRSPSPP DDPDSTLENS DQGAVRRREV NRCSGCKRKL GLIGFRCRCG
101: EMFCSKHRYS DRHECRFDYK AAGREMIAKE NPVVRPAKIL KV
101: EMFCSKHRYS DRHECRFDYK AAGREMIAKE NPVVRPAKIL KV
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.