Factsheet for VIT_13s0064g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g07950.t01	Wine grape	cytosol, nucleus, plastid	72.09	72.09
KRH29694	Soybean	cytosol	70.35	69.14
VIT_06s0004g01820.t01	Wine grape	nucleus	68.6	68.6
KRH24692	Soybean	cytosol	69.19	68.39
KRH10187	Soybean	nucleus	64.53	64.53
KRH23151	Soybean	nucleus	64.53	64.53
VIT_18s0001g01260.t01	Wine grape	nucleus	20.35	52.24
VIT_18s0001g00430.t01	Wine grape	nucleus	19.77	50.75
VIT_08s0007g03530.t01	Wine grape	nucleus	43.6	46.58
VIT_02s0025g05080.t01	Wine grape	cytosol	24.42	42.0
VIT_16s0022g01980.t01	Wine grape	nucleus	36.05	40.79
VIT_02s0025g05050.t01	Wine grape	nucleus	40.12	40.12
VIT_13s0064g01220.t01	Wine grape	nucleus	38.37	38.37
VIT_01s0011g02290.t01	Wine grape	nucleus	31.4	35.06
VIT_06s0004g01790.t01	Wine grape	nucleus	26.74	32.39
VIT_16s0022g01680.t01	Wine grape	nucleus	31.98	23.01

Protein Annotations

EntrezGene:100852460	wikigene:100852460	MapMan:35.1	Gene3D:4.10.1110.10	UniProt:A5C670	EMBL:AM483739
InterPro:AN1-like_Znf	ProteinID:CAN83974	ProteinID:CAN83974.1	ProteinID:CCB49490	ProteinID:CCB49490.1	EMBL:FN595509
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008270	GO:GO:0046872
InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896	EntrezGene:LOC100852460	wikigene:LOC100852460	PFAM:PF01428
PFAM:PF01754	PFscan:PS51036	PFscan:PS51039	PANTHER:PTHR10634	PANTHER:PTHR10634:SF63	SMART:SM00154
SMART:SM00259	SUPFAM:SSF118310	SUPFAM:SSF57716	TIGR:TC51852	TIGR:TC53810	UniParc:UPI0001524C0A
ArrayExpress:VIT_13s0064g01210	EnsemblPlantsGene:VIT_13s0064g01210	EnsemblPlants:VIT_13s0064g01210.t01	unigene:Vvi.7136	RefSeq:XP_003633556	RefSeq:XP_003633556.1
RefSeq:XP_003633557	RefSeq:XP_003633557.1	InterPro:Znf_A20	InterPro:Znf_AN1	:	:

Description

No Description!

Coordinates

chr13:+:23096329..23097150

Molecular Weight (calculated)

18505.0 Da

IEP (calculated)

7.961

GRAVY (calculated)

-0.371

Length

172 amino acids

Sequence
(BLAST)

001: MDHNETGCQA PPEAPILCIN NCGFFGSAAT MNMCSKCHKD LVLKQEQAKL AASSFESIVE GSSNCNAKES MVAIAKADII QTGPSESMPV PTQAACASPS
101: ETNDRVKEGP NRCSSCRKRV GLTGFNCRCG NIFCAVHRYS DKHACPFDYR TAARDAIAKS NPVIKPEKLD KI

Best Arabidopsis Sequence Match ( AT1G51200.2 )
(BLAST)

001: MDHDKTGCQS PPEGPKLCTN NCGFFGSAAT MNMCSKCHKD MLFQQEQGAK FASAVSGTSS SSNIIKETFT AALVDIETKS VEPMTVSVQP SSVQVVAEVV
101: APEEAAKPKG PSRCTTCNKR VGLTGFKCRC GSLFCGTHRY ADVHDCSFNY HAAAQEAIAK ANPVVKAEKL DKI

Arabidopsis Description

SAP2Zinc finger A20 and AN1 domain-containing stress-associated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X0]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.