Factsheet for VIT_01s0011g02290.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01980.t01	Wine grape	nucleus	73.38	74.34
VIT_16s0022g01680.t01	Wine grape	nucleus	88.31	56.9
VIT_18s0001g01260.t01	Wine grape	nucleus	20.13	46.27
VIT_18s0001g00430.t01	Wine grape	nucleus	20.13	46.27
CDX90265	Canola	cytosol	35.06	41.54
CDY65025	Canola	cytosol	35.06	41.54
AT4G14225.1	Thale cress	cytosol, mitochondrion, plastid	33.12	40.8
Bra010753.1-P	Field mustard	cytosol	34.42	40.77
GSMUA_Achr9P17970_001	Banana	cytosol, mitochondrion, nucleus	36.36	39.72
GSMUA_Achr9P07600_001	Banana	nucleus	36.36	39.72
VIT_02s0025g05080.t01	Wine grape	cytosol	25.32	39.0
VIT_08s0007g03530.t01	Wine grape	nucleus	40.26	38.51
VIT_02s0025g05050.t01	Wine grape	nucleus	42.21	37.79
TraesCS2B01G153100.1	Wheat	peroxisome	35.06	35.06
TraesCS2B01G235400.1	Wheat	peroxisome	30.52	34.56
TraesCS2A01G209400.1	Wheat	peroxisome	30.52	34.56
TraesCS2A01G130400.1	Wheat	peroxisome	34.42	34.42
TraesCS2B01G153200.1	Wheat	peroxisome	34.42	34.19
TraesCS2B01G277500.1	Wheat	cytosol, nucleus, peroxisome	30.52	34.06
TraesCS2D01G215700.1	Wheat	peroxisome	29.87	33.82
TraesCS2B01G235600.1	Wheat	peroxisome	29.87	33.82
TraesCS2A01G131000.1	Wheat	cytosol, mitochondrion, nucleus	30.52	33.81
TraesCS2D01G133000.1	Wheat	cytosol, nucleus, plastid	34.42	33.54
TraesCS2B01G153300.1	Wheat	peroxisome	34.42	33.12
TraesCS2B01G153400.1	Wheat	peroxisome	34.42	33.12
TraesCS2B01G153000.1	Wheat	nucleus	33.77	32.7
TraesCS2A01G131200.1	Wheat	peroxisome	33.12	32.69
TraesCS2D01G133100.1	Wheat	peroxisome	33.12	32.69
TraesCS2A01G130500.1	Wheat	peroxisome	33.77	32.5
TraesCS2D01G133200.1	Wheat	peroxisome	33.77	32.5
VIT_06s0004g01820.t01	Wine grape	nucleus	35.71	31.98
HORVU2Hr1G036250.1	Barley	nucleus	32.47	31.65
VIT_13s0064g01210.t01	Wine grape	nucleus	35.06	31.4
TraesCS6A01G404200.1	Wheat	peroxisome	33.12	31.29
TraesCS2D01G198000.1	Wheat	nucleus	32.47	31.25
VIT_08s0007g07950.t01	Wine grape	cytosol, nucleus, plastid	34.42	30.81
HORVU2Hr1G022940.2	Barley	cytosol, peroxisome	33.77	30.41
TraesCS6A01G404100.1	Wheat	peroxisome	33.12	30.36
Os07t0169500-00	Rice	cytosol, peroxisome, plastid	29.87	30.26
TraesCS2A01G189900.1	Wheat	nucleus	31.17	30.19
TraesCSU01G028600.1	Wheat	nucleus	27.92	30.07
TraesCS6D01G387600.1	Wheat	peroxisome	33.12	30.0
TraesCS5B01G430200.1	Wheat	nucleus	29.22	29.8
TraesCS5B01G432700.1	Wheat	nucleus	31.17	29.63
TraesCS5D01G438400.1	Wheat	nucleus	31.17	29.63
TraesCS5A01G428300.1	Wheat	nucleus	29.22	29.61
TraesCS5D01G436300.1	Wheat	plastid	29.22	29.61
TraesCS5D01G438600.1	Wheat	nucleus	31.17	29.45
TraesCS6B01G448700.1	Wheat	peroxisome	32.47	29.41
Os03t0793000-01	Rice	nucleus	31.82	28.99
HORVU5Hr1G103980.1	Barley	nucleus	27.92	28.86
TraesCS5A01G430800.1	Wheat	nucleus	30.52	28.83
TraesCS5B01G430300.1	Wheat	nucleus	33.12	28.81
TraesCS5A01G428400.1	Wheat	nucleus	33.12	28.65
TraesCS5D01G436400.1	Wheat	nucleus	32.47	28.09
VIT_13s0064g01220.t01	Wine grape	nucleus	31.17	27.91
HORVU5Hr1G104360.1	Barley	nucleus	29.87	27.88
VIT_06s0004g01790.t01	Wine grape	nucleus	25.32	27.46
OQU90855	Sorghum	nucleus	31.17	26.67
HORVU5Hr1G103940.1	Barley	nucleus	33.12	24.76
Zm00001d034389_P001	Maize	peroxisome	23.38	22.36
Os08t0436400-00	Rice	nucleus	30.52	20.98
EES13895	Sorghum	nucleus	33.77	20.0
EES13894	Sorghum	cytosol	31.82	19.6
OQU80520	Sorghum	cytosol	33.12	19.03
OQU76503	Sorghum	peroxisome	21.43	18.97
Os03t0793300-01	Rice	nucleus	12.99	8.44

Protein Annotations

EntrezGene:100266326	wikigene:100266326	MapMan:35.1	Gene3D:4.10.1110.10	InterPro:AN1-like_Znf	ProteinID:CCB50977
ProteinID:CCB50977.1	UniProt:F6HF37	EMBL:FN595752	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0008270	GO:GO:0046872	InterPro:IPR000058	InterPro:IPR002653	InterPro:IPR035896
EntrezGene:LOC100266326	wikigene:LOC100266326	PFAM:PF01428	PFAM:PF01754	PFscan:PS51036	PFscan:PS51039
PANTHER:PTHR10634	PANTHER:PTHR10634:SF65	SMART:SM00154	SMART:SM00259	SUPFAM:SSF118310	SUPFAM:SSF57716
UniParc:UPI0002109E39	ArrayExpress:VIT_01s0011g02290	EnsemblPlantsGene:VIT_01s0011g02290	EnsemblPlants:VIT_01s0011g02290.t01	RefSeq:XP_002277381	RefSeq:XP_002277381.1
InterPro:Znf_A20	InterPro:Znf_AN1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:2075903..2076512

Molecular Weight (calculated)

17280.9 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.661

Length

154 amino acids

Sequence
(BLAST)

001: MEDPTLCANG CGFFGTPATQ NLCSKCYRDF LKEEEESTKA KAMSMKKAIR PRVESTSSLD DVAISMVQLS LSFDNTKKTI NGNSSTKKSE QCEMCKKKVG
101: IIGFKCRCGS MFCGKHRLPE KHECNFDYKA MGREILMKQN PPLKPEKLPG ENFD

Best Arabidopsis Sequence Match ( AT1G12440.2 )
(BLAST)

001: MGSEQNDSTS FSPSEPKLCV KGCGFFGSPS NMNLCSKCYR DIRATEEQTA SAKAAVEKSL NPNKPKTQPQ QSQEITQGVL GSGSSSSSTR GGDSAAAPLD
101: PPKSTATRCL SCNKKVGVTG FKCRCGSTFC GTHRYPESHE CQFDFKGVAR EAIAKANPVV KADKVDRI

Arabidopsis Description

SAP1Zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNI8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.