Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G430300.1 | Wheat | nucleus | 95.51 | 96.05 |
| TraesCS5D01G436400.1 | Wheat | nucleus | 93.82 | 93.82 |
| TraesCS5A01G430800.1 | Wheat | nucleus | 72.47 | 79.14 |
| TraesCS5A01G428300.1 | Wheat | nucleus | 66.29 | 77.63 |
| HORVU5Hr1G103940.1 | Barley | nucleus | 86.52 | 74.76 |
| TraesCS2A01G239100.1 | Wheat | peroxisome | 45.51 | 50.94 |
| Os03t0793000-01 | Rice | nucleus | 46.63 | 49.11 |
| TraesCS2A01G209400.1 | Wheat | peroxisome | 37.08 | 48.53 |
| TraesCS2A01G131000.1 | Wheat | cytosol, mitochondrion, nucleus | 37.64 | 48.2 |
| TraesCS2A01G130400.1 | Wheat | peroxisome | 41.57 | 48.05 |
| OQU90855 | Sorghum | nucleus | 47.75 | 47.22 |
| TraesCS5A01G429800.1 | Wheat | nucleus, peroxisome, plastid | 41.01 | 45.34 |
| TraesCS6A01G404100.1 | Wheat | peroxisome | 42.7 | 45.24 |
| TraesCS2A01G131200.1 | Wheat | peroxisome | 38.76 | 44.23 |
| TraesCS2A01G189900.1 | Wheat | nucleus | 39.33 | 44.03 |
| TraesCS2A01G130500.1 | Wheat | peroxisome | 39.33 | 43.75 |
| TraesCS6A01G404200.1 | Wheat | peroxisome | 39.89 | 43.56 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 29.78 | 42.4 |
| CDX90265 | Canola | cytosol | 29.21 | 40.0 |
| Bra010753.1-P | Field mustard | cytosol | 29.21 | 40.0 |
| Zm00001d034389_P001 | Maize | peroxisome | 35.96 | 39.75 |
| PGSC0003DMT400088043 | Potato | cytosol | 29.78 | 39.26 |
| CDY65025 | Canola | cytosol | 28.65 | 39.23 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 30.9 | 39.01 |
| PGSC0003DMT400086587 | Potato | nucleus | 26.97 | 38.71 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 28.65 | 38.64 |
| TraesCS5A01G263500.1 | Wheat | cytosol | 33.15 | 38.31 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 30.34 | 38.3 |
| PGSC0003DMT400097759 | Potato | cytosol | 28.09 | 37.04 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 35.39 | 36.84 |
| KRH38756 | Soybean | nucleus, plastid | 31.46 | 36.13 |
| Bra019169.1-P | Field mustard | cytosol | 26.4 | 35.88 |
| CDY49709 | Canola | cytosol | 26.4 | 35.88 |
| KRH09258 | Soybean | cytosol, extracellular, nucleus, plastid | 28.09 | 35.21 |
| AT4G25380.1 | Thale cress | nucleus | 25.28 | 34.62 |
| CDY57287 | Canola | cytosol | 26.4 | 34.56 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 29.21 | 34.21 |
| CDX92701 | Canola | cytosol | 25.84 | 34.07 |
| TraesCS7A01G404300.1 | Wheat | cytosol | 32.02 | 33.73 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 28.65 | 33.12 |
| TraesCS6A01G165500.1 | Wheat | cytosol, extracellular | 33.71 | 31.25 |
| TraesCS1A01G134300.1 | Wheat | cytosol, extracellular, nucleus | 25.28 | 29.22 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 28.09 | 20.92 |
| Os03t0793300-01 | Rice | nucleus | 16.85 | 12.66 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 |
| PFAM:PF01754 | PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF40 | SMART:SM00154 |
| SMART:SM00259 | SUPFAM:SSF118310 | SUPFAM:SSF57716 | EnsemblPlantsGene:TraesCS5A01G428400 | EnsemblPlants:TraesCS5A01G428400.1 | InterPro:Znf_A20 |
| InterPro:Znf_AN1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:613457155..613458090
Molecular Weight (calculated)
18325.6 Da
IEP (calculated)
8.265
GRAVY (calculated)
-0.206
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDASAATT AQKRKYTEEE ETAGLCANGC GFFGAAATGN MCSKCYRDHV HAATADTAAA GSVYFIDPAG STAPPPAKKA RMTVAVPSSD GAAAPSAAVA
101: VDPAVTPAKQ PAVPANRCAA CGKKVGLLGF RCRCEGTFCS VHRYSEKHDC GFDYKAAGQE QIAKHNPLVV ADKMTGRI
101: VDPAVTPAKQ PAVPANRCAA CGKKVGLLGF RCRCEGTFCS VHRYSEKHDC GFDYKAAGQE QIAKHNPLVV ADKMTGRI
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Arabidopsis Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.